RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ARPC5O15511 151 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 FRS3O43559 492 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 SIGLEC6O43699 453 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 CREBL2O60519 120 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 NDUFV2P19404 249 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 TRHRP34981 398 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 SLC11A1P49279 550 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 MECP2P51608 486 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 DECR1Q16698 335 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 UBE2NLQ5JXB2 153 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 KHDRBS2Q5VWX1 349 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 DMKNQ6E0U4 476 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 NHLRC1Q6VVB1 395 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 PAQR7Q86WK9 346 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 FAM129CQ86XR2 697 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 NKAIN4Q8IVV8 208 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 MEIOBQ8N635 442 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 OR10H4Q8NGA5 316 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 OR9A1PQ8NGU1 263 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 ZDHHC1Q8WTX9 485 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 THEM6Q8WUY1 208 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 CMTM3Q96MX0 182 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 RIOK2Q9BVS4 552 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 ZCCHC3Q9NUD5 404 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 KCNK7Q9Y2U2 307 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 A0A0G2JPF8 293 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 HNRNPCL3B7ZW38 293 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 AQP8O94778 261 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 ATP1B1P05026 303 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 IL5P05113 134 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 H2AFB1P0C5Y9 115 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 HNRNPCL4P0DMR1 293 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 PBLDP30039 288 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 PDSS1Q5T2R2 415 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 OLFML2AQ68BL7 652 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 ZNF660Q6AZW8 331 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 NRMQ8IXM6 262 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 PNPLA2Q96AD5 504 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 LRRC46Q96FV0 321 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 SAMD8Q96LT4 415 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 RBM14Q96PK6 669 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 UBQLN3Q9H347 655 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 NOX3Q9HBY0 568 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-201ENST00000298317 PIP5K1CO60331 668 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 STX11O75558 287 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 NRG3P56975 720 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 AP3S2P59780 193 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 TMEM173Q86WV6 379 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 OR13C5Q8NGS8 318 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 LGALS14Q8TCE9 139 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 AUTS2Q8WXX7 1259 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 C4orf36Q96KX1 117 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 ARL6Q9H0F7 186 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 GLIPR2Q9H4G4 154 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 MED20Q9H944 212 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 SLC6A20Q9NP91 592 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 MED11Q9P086 117 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 OPN4Q9UHM6 478 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 MTCL1Q9Y4B5 1905 aaKnown RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 COL4A3Q01955 1670 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 ANKRD61A6NGH8 418 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 GABARAPH6UMI1 98 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 CDC42EP2O14613 210 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 FLRT2O43155 660 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 FGBP02675 491 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 GLAP06280 429 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 ZGLP1P0C6A0 271 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 ANXA7P20073 488 aaKnown RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 ACVR1BP36896 505 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 STXBP1P61764 594 aaKnown RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 MAT1AQ00266 395 aaKnown RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 FGL1Q08830 312 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 SLC8B1Q6J4K2 584 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 APOOLQ6UXV4 268 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 RPTNQ6XPR3 784 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 MBOAT2Q6ZWT7 520 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 SYT9Q86SS6 491 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 CMTM4Q8IZR5 234 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 EID2Q8N6I1 236 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 OR52I2Q8NH67 350 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 GCDHQ92947 438 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 HCAR1Q9BXC0 346 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 MS4A8Q9BY19 250 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 TINAGL1Q9GZM7 467 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 ESRP2Q9H6T0 727 aaKnown RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 GPN1Q9HCN4 374 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 LHX9Q9NQ69 397 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 NFKBIL1Q9UBC1 381 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 HS3ST2Q9Y278 367 aa12.54□□□□□ -0.4
RPUSD4-201ENST00000298317 TMPRSS11DO60235 418 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 KDM4BO94953 1096 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 THY1P04216 161 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 SELLP14151 372 aa12.53□□□□□ -0.4
RPUSD4-201ENST00000298317 CAPZA2P47755 286 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms