RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 KRBOX1C9JBD0 128 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 CASC3O15234 703 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 TPT1P13693 172 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 TNFRSF1BP20333 461 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 HNRNPA2B1P22626 353 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 HYAL2Q12891 473 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 SELPLGQ14242 412 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ARHGAP40Q5TG30 622 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 FAM122CQ6P4D5 195 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 KDELC1Q6UW63 502 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 CFAP77Q6ZQR2 320 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 BEND4Q6ZU67 534 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF551Q7Z340 670 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ESX1Q8N693 406 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR5H2Q8NGV7 314 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 CD200R1Q8TD46 325 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLC41A3Q96GZ6 507 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF587Q96SQ5 575 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 SULT4A1Q9BR01 284 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 TMEM121BQ9BXQ6 578 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 NAA50Q9GZZ1 169 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 A0A1W2PPL8 197 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 B4DGG1 531 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 CTDSP2O14595 271 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 NDUFB2O95178 105 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 UBBP0CG47 229 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 UBCP0CG48 685 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 AQP2P41181 271 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 FOXA1P55317 472 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 CBLL1Q75N03 491 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 TMEM102Q8N9M5 508 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR5W2Q8NH69 310 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 ALG14Q96F25 216 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 NELFAQ9H3P2 528 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 HHATLQ9HCP6 504 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 E2F3O00716 465 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 PLGP00747 810 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 SDC1P18827 310 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 CLRN1P58418 232 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLC26A5P58743 744 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 MC2RQ01718 297 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 TRIM61Q5EBN2 209 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF789Q5FWF6 425 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 ATAD3CQ5T2N8 411 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLC18B1Q6NT16 456 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 NRARPQ7Z6K4 114 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 TP53INP2Q8IXH6 220 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR4K13Q8NH42 304 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 BRIX1Q8TDN6 353 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 HOXB13Q92826 284 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 SAMD8Q96LT4 415 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 UBE2J1Q9Y385 318 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 KLK4Q9Y5K2 254 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 IGHV1OR15-9A0A0B4J2B8 117 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF850A8MQ14 1090 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 POLR1CO15160 346 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 GFRA3O60609 400 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 BMP4P12644 408 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 C21orf33P30042 268 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 SSTR4P31391 388 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 ALDH3B1P43353 468 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 MAGEA3P43357 314 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 NKX6-1P78426 367 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR13C3Q8NGS6 347 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 DCUN1D4Q92564 292 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 GTF2H4Q92759 462 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 KCTD12Q96CX2 325 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 OLAHQ9NV23 265 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 ABRACLQ9P1F3 81 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 DENND4AQ7Z401 1863 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 LOC102723532A0A0G2JNH3 316 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 A0A1W2PQF6 199 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 METTL12A8MUP2 240 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 AKAIN1P0CW23 69 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 MPLP40238 635 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 IDH3GP51553 393 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 AFF3P51826 1226 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 PIN1Q13526 163 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 TMEM225Q6GV28 225 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR4C11Q6IEV9 310 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLC9B2Q86UD5 537 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 CNTN4Q8IWV2 1026 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 ARRDC1-AS1Q9H2J1 176 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 NIPAL2Q9H841 368 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 LHX3Q9UBR4 397 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 YARS2Q9Y2Z4 477 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 A3GALT2U3KPV4 340 aa11.09□□□□□ -0.63
SYNGAP1-201ENST00000293748 RTCAO00442 366 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF26P17031 533 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 PGCP20142 388 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 CASRP41180 1078 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 RACK1P63244 317 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 OC90Q02509 493 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC14A2Q15849 920 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 PLK5Q496M5 336 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 DEFB134Q4QY38 66 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 MLIPQ5VWP3 458 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms