RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 OR5M10Q6IEU7 315 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 HMBOX1Q6NT76 420 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 SLC48A1Q6P1K1 146 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 DCDC5Q6ZRR9 648 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 MEPCEQ7L2J0 689 aaKnown RBP13.07□□□□□ -0.32
CDH3-201ENST00000264012 NUDT8Q8WV74 236 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 SLC5A7Q9GZV3 580 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 KCNIP3Q9Y2W7 256 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 ASB1Q9Y576 335 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 PLPP1O14494 284 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 ZFAND5O76080 213 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 PSMB10P40306 273 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 DPTQ07507 201 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 RNASE10Q5GAN6 216 aaKnown RBP13.07□□□□□ -0.32
CDH3-201ENST00000264012 SFRP4Q6FHJ7 346 aaPredicted RBP13.07□□□□□ -0.32
CDH3-201ENST00000264012 SPNS2Q8IVW8 549 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 TIGD4Q8IY51 512 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 NINJ1Q92982 152 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 M0R233 179 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 CNIH2Q6PI25 160 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 SH2D5Q6ZV89 423 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 CCDC28AQ8IWP9 274 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 OR4F15Q8NGB8 312 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 KIR3DX1Q9H7L2 352 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 MEPEQ9NQ76 525 aaPredicted RBP13.07□□□□□ -0.32
CDH3-201ENST00000264012 WASF3Q9UPY6 502 aa13.07□□□□□ -0.32
CDH3-201ENST00000264012 SSC5DA1L4H1 1573 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 TRAV18A0A075B6X5 111 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 ACP2P11117 423 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 SLC5A2P31639 672 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 CCR2P41597 374 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 HTR3AP46098 478 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 ACSM3Q53FZ2 586 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 DLEU7Q6UYE1 221 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 MAP3K3Q99759 626 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 ZNF704Q6ZNC4 412 aaPredicted RBP13.06□□□□□ -0.32
CDH3-201ENST00000264012 EID2Q8N6I1 236 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 OR13C2Q8NGS9 318 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 C4orf36Q96KX1 117 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 SLC6A18Q96N87 628 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 PBX4Q9BYU1 374 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 ZNF350Q9GZX5 532 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 C1GALT1Q9NS00 363 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 SACM1LQ9NTJ5 587 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 KLHL9Q9P2J3 617 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 GLS2Q9UI32 602 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 HS3ST3A1Q9Y663 406 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 B3GALT4O96024 378 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 DNASE1P24855 282 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 ITGB8P26012 769 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 AFF3P51826 1226 aaKnown RBP13.06□□□□□ -0.32
CDH3-201ENST00000264012 KIAA1024LP59773 190 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 ZNF750Q32MQ0 723 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 DNAJC22Q8N4W6 341 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 MSANTD3Q96H12 275 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 SEMA6CQ9H3T2 930 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 TMEM38AQ9H6F2 299 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 BABAM2Q9NXR7 383 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 TAS2R8Q9NYW2 309 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 PPT2Q9UMR5 302 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 RP1L1Q8IWN7 2480 aaPredicted RBP13.06□□□□□ -0.32
CDH3-201ENST00000264012 FAM155AB1AL88 458 aaPredicted RBP13.06□□□□□ -0.32
CDH3-201ENST00000264012 I3L521 148 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 TNFRSF10CO14798 259 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 ZNF264O43296 627 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 TOXO94900 526 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 CER1O95813 267 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 SLC6A12P48065 614 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 GPR19Q15760 415 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 TMEM205Q6UW68 189 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 RNF113BQ8IZP6 322 aaKnown RBP13.06□□□□□ -0.32
CDH3-201ENST00000264012 ZNF417Q8TAU3 575 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 TMEM246Q9BRR3 403 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 C1QTNF3Q9BXJ4 246 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 A4GALTQ9NPC4 353 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 SIT1Q9Y3P8 196 aa13.06□□□□□ -0.32
CDH3-201ENST00000264012 A6NLC8 198 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 AP1G1O43747 822 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 SLC16A7O60669 478 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 CTGFP29279 349 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 TSFMP43897 325 aaKnown RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 ACTBP60709 375 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 ACTG1P63261 375 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 ATAD3CQ5T2N8 411 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 RAB12Q6IQ22 244 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 TBPL2Q6SJ96 375 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 ZNF322Q6U7Q0 402 aaPredicted RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 OR14A16Q8NHC5 309 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 ZNF700Q9H0M5 742 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 RABL2AQ9UBK7 228 aaPredicted RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 MGAT4CQ9UBM8 478 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 RABL2BQ9UNT1 228 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 SLC6A5Q9Y345 797 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 DCDC2BA2VCK2 349 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 CREBL2O60519 120 aaPredicted RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 SCRG1O75711 98 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 OPN1LWP04000 364 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 GPR139Q6DWJ6 353 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 AWAT2Q6E213 333 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 SLC25A44Q96H78 314 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms