RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ZNF395Q9H8N7 513 aaPredicted RBP12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 TMEM45AQ9NWC5 275 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 BORCS7-ASMTA0A0B4J1R7 106 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 ZXDBP98169 803 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 ZNF778Q96MU6 729 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 MYOTQ9UBF9 498 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 CTNSO60931 367 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 CKMT1AP12532 417 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 NPR2P20594 1047 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 RAD52P43351 418 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 SIGLEC14Q08ET2 396 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 RAB31Q13636 194 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 ZNF684Q5T5D7 378 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 LETMD1Q6P1Q0 360 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 TMEM71Q6P5X7 295 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 KLBQ86Z14 1044 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 ACBD7Q8N6N7 88 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 COQ8AQ8NI60 647 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 MSI2Q96DH6 328 aaKnown RBP12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 SLC6A15Q9H2J7 730 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 MTMR10Q9NXD2 777 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 SNX11Q9Y5W9 270 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 SERPINA5P05154 406 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 CCL7P80098 99 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 RHDQ02161 417 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 COQ5Q5HYK3 327 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 ZNF845Q96IR2 970 aaPredicted RBP12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 MENTQ9BUN1 341 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 ENAMQ9NRM1 1142 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 RNF6Q9Y252 685 aa12.69□□□□□ -0.38
PDGFRB-201ENST00000261799 ZNF44P15621 663 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 GPR3P46089 330 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 SH3BP2P78314 561 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 ZNF252P-AS1Q0IIN9 211 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 NAGSQ8N159 534 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 ARRDC2Q8TBH0 407 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 MED18Q9BUE0 208 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 DNAJB6O75190 326 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 DBHP09172 617 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 SFTPCP11686 197 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 ZNF92Q03936 586 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 TRA2AQ13595 282 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 ZMAT1Q5H9K5 638 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 PIANPQ8IYJ0 282 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 OR4K5Q8NGD3 323 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 NXF5Q9H1B4 397 aaKnown RBP12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 DCSTAMPQ9H295 470 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 C12orf4Q9NQ89 552 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 PLEKHJ1Q9NW61 149 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 PAQR5Q9NXK6 330 aaPredicted RBP12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 DUSP13Q9UII6 198 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 ZCWPW2A0A1B0GU75 182 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 SLC35E2P0CK97 266 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 IL9P15248 144 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 GGT1P19440 569 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 PYCR3Q53H96 274 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 DND1Q8IYX4 353 aaKnown RBP12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 LRR1Q96L50 414 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 SLC6A20Q9NP91 592 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 PRMT8Q9NR22 394 aaPredicted RBP12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 KLHL9Q9P2J3 617 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 PMF1-BGLAPU3KQ54 211 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 HHLA1C9JL84 531 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 SHOXO15266 292 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 NARSO43776 548 aaKnown RBP12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 IFNA2P01563 188 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 CD1CP29017 333 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 ERVK-25P63136 954 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 C9orf152Q5JTZ5 239 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 HPS1Q92902 700 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 INPP5KQ9BT40 448 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 DHRS4Q9BTZ2 278 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 ACSS1Q9NUB1 689 aaPredicted RBP12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 MYH3P11055 1940 aa12.68□□□□□ -0.38
PDGFRB-201ENST00000261799 A0A1W2PPK0 400 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 FAM171A2A8MVW0 826 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 M0R3H8 397 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 DSCR3O14972 297 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 RASAL1O95294 804 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 HMGA1P17096 107 aaKnown RBP12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 CELP19835 753 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 KCNAB1Q14722 419 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 OR1Q1Q15612 314 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 WFDC8Q8IUA0 241 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 FAIMQ9NVQ4 179 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TBCCD1Q9NVR7 557 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 B4DXG7 233 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 MT-CO2P00403 227 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 EFNA3P52797 238 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 EPHA5P54756 1037 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 MTFR2Q6P444 385 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 NDUFAF7Q7L592 441 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 OR5D14Q8NGL3 314 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 ZNF675Q8TD23 568 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 MAL2Q969L2 176 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TREX1Q9NSU2 369 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TAS2R1Q9NYW7 299 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms