RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 EXTL2Q9UBQ6 330 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 CDH10Q9Y6N8 788 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 FRYLO94915 3013 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 SNTNA6NMZ2 147 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 H3BUI4 141 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 OR7A10O76100 309 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 MRPL3P09001 348 aaKnown RBP9.38□□□□□ -0.91
COPB1-201ENST00000249923 CT62P0C5K7 136 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 ELK1P19419 428 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 LSSP48449 732 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 SRP9P49458 86 aaKnown RBP9.38□□□□□ -0.91
COPB1-201ENST00000249923 OR10A3P58181 314 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 TNFRSF17Q02223 184 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 SLC3A1Q07837 685 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 BTN1A1Q13410 526 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 CDC73Q6P1J9 531 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 ARL9Q6T311 187 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 DGAT2L6Q6ZPD8 337 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 FAM109AQ8N4B1 249 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 LSM14AQ8ND56 463 aaKnown RBP9.38□□□□□ -0.91
COPB1-201ENST00000249923 OR5T3Q8NGG3 340 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 OR14C36Q8NHC7 312 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 CEP76Q8TAP6 659 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 MS4A4EQ96PG1 132 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 JAM3Q9BX67 310 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 OR52D1Q9H346 318 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 KIR3DX1Q9H7L2 352 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 A0A0G2JMP0 313 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 A0A0X1KG70 313 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 PRSS38A1L453 326 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 SCO2O43819 266 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 LDB3O75112 727 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 NGFRP08138 427 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 STAT5AP42229 794 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 ATP12AP54707 1039 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 E2F1Q01094 437 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 OC90Q02509 493 aaPredicted RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 DUSP8Q13202 625 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 GPR68Q15743 365 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 ARHGAP11BQ3KRB8 267 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 TMEM196Q5HYL7 178 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 TMEM31Q5JXX7 168 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 SIGIRRQ6IA17 410 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 PARM1Q6UWI2 310 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 RPTNQ6XPR3 784 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 SSX6Q7RTT6 188 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 PIAS4Q8N2W9 510 aaPredicted RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 LRRC25Q8N386 305 aaPredicted RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 SAMD12Q8N8I0 201 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 ZNF784Q8NCA9 323 aaPredicted RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 OR4M2Q8NGB6 313 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 ZNF671Q8TAW3 534 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 OSTF1Q92882 214 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 KIAA1143Q96AT1 154 aaPredicted RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 TMEM43Q9BTV4 400 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 ZNF350Q9GZX5 532 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 CLDND1Q9NY35 253 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 RABL2AQ9UBK7 228 aaPredicted RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 DPP7Q9UHL4 492 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 VPS13AQ96RL7 3174 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 A0A0G2JK05 382 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 A0A1W2PQF6 199 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 GTPBP1O00178 669 aaKnown RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 LYRM1O43325 122 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 OR5F1O95221 314 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 ZNF250P15622 560 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 TSFMP43897 325 aaKnown RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 BLVRAP53004 296 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 RPS21P63220 83 aaKnown RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 EFR3AQ14156 821 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 GNA13Q14344 377 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 KRT33BQ14525 404 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 ZNF433Q8N7K0 673 aaPredicted RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 OR2T33Q8NG76 320 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 OR52N1Q8NH53 320 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 ADAMTS15Q8TE58 950 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 HERVK_113Q902F9 699 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 HSD17B8Q92506 261 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 GAS2L1Q99501 681 aaPredicted RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 SLC23A1Q9UHI7 598 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 PILRAQ9UKJ1 303 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 WDR45Q9Y484 360 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 CEP290O15078 2479 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 A6NCN8 305 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 GNB5O14775 395 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 RNF13O43567 381 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 FGF17O60258 216 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 PAHP00439 452 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 PLATP00750 562 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 GAAP10253 952 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 NDUFV2P19404 249 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 POU3F3P20264 500 aaPredicted RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 DSG2Q14126 1118 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 MRPL2Q5T653 305 aaKnown RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 CXXC5Q7LFL8 322 aaKnown RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 PATE1Q8WXA2 126 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 GAL3ST3Q96A11 431 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 RAB11FIP5Q9BXF6 653 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 SIDT1Q9NXL6 827 aaKnown RBP9.37□□□□□ -0.91
COPB1-201ENST00000249923 DAPP1Q9UN19 280 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms