RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PTNP21246 168 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 KIR2DL3P43628 341 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 C1QTNF12Q5T7M4 302 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 GARNL3Q5VVW2 1013 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 RPL13AP3Q6NVV1 102 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 CNIH2Q6PI25 160 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 CXXC5Q7LFL8 322 aaKnown RBP20.26■□□□□ 0.83
RNF39-201ENST00000244360 LHFPL3Q86UP9 236 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 CPOQ8IVL8 374 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 DMRTB1Q96MA1 342 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 ZNF559Q9BR84 538 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 PPP1R3EQ9H7J1 279 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 COMMD3Q9UBI1 195 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 NDRG2Q9UN36 371 aaKnown RBP20.26■□□□□ 0.83
RNF39-201ENST00000244360 SLCO1B1Q9Y6L6 691 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 FAM25AB3EWG3 89 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 FAM25CB3EWG5 89 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 FAM25GB3EWG6 89 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 SOCS6O14544 535 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 OR10H2O60403 315 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 LALBAP00709 142 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 IFI30P13284 250 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 CTBP2P56545 445 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 BDH1Q02338 343 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 GRAMD2AQ8IUY3 354 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 MCATQ8IVS2 390 aaKnown RBP20.26■□□□□ 0.83
RNF39-201ENST00000244360 Q8N402 240 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 LNX2Q8N448 690 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 OR52L1Q8NGH7 329 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 KLHDC7BQ96G42 594 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 RNF170Q96K19 258 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 ATF6BQ99941 703 aa20.26■□□□□ 0.83
RNF39-201ENST00000244360 RBFOX1Q9NWB1 397 aaKnown RBP20.26■□□□□ 0.83
RNF39-201ENST00000244360 A8MV72 311 aaPredicted RBP20.25■□□□□ 0.83
RNF39-201ENST00000244360 PSG6Q00889 435 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.25■□□□□ 0.83
RNF39-201ENST00000244360 AMZ1Q400G9 498 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.25■□□□□ 0.83
RNF39-201ENST00000244360 TIGD3Q6B0B8 471 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 MARCH9Q86YJ5 346 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 NEIL3Q8TAT5 605 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 FAM174AQ8TBP5 190 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 ATP13A2Q9NQ11 1180 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 NUFIP1Q9UHK0 495 aaKnown RBP20.25■□□□□ 0.83
RNF39-201ENST00000244360 KLHL21Q9UJP4 597 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 MTCH2Q9Y6C9 303 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 B4DGG1 531 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 GABRPO00591 440 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 SLC19A2O60779 497 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 RNF144AP50876 292 aaPredicted RBP20.25■□□□□ 0.83
RNF39-201ENST00000244360 IGLV3-21P80748 117 aaPredicted RBP20.25■□□□□ 0.83
RNF39-201ENST00000244360 C6orf183Q5T699 404 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 NIPAL3Q6P499 406 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 TCTE3Q8IZS6 198 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 AVL9Q8NBF6 648 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 DUSP18Q8NEJ0 188 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 DNAJA4Q8WW22 397 aaPredicted RBP20.25■□□□□ 0.83
RNF39-201ENST00000244360 FOLH1BQ9HBA9 442 aa20.25■□□□□ 0.83
RNF39-201ENST00000244360 H2AFY2Q9P0M6 372 aaPredicted RBP20.25■□□□□ 0.83
RNF39-201ENST00000244360 A0A0B4J2E0 115 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 A0A1B0GX12 115 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 RCBTB2O95199 551 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 FUT1P19526 365 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 EVX1P49640 407 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 EMDP50402 254 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 THOC7Q6I9Y2 204 aaKnown RBP20.24■□□□□ 0.83
RNF39-201ENST00000244360 SIRT6Q8N6T7 355 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 ACOT12Q8WYK0 555 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 CNOT9Q92600 299 aaKnown RBP20.24■□□□□ 0.83
RNF39-201ENST00000244360 BPIFA2Q96DR5 249 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 TMEM246Q9BRR3 403 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 ENKD1Q9H0I2 346 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 ZNF576Q9H609 170 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 TNFRSF10DQ9UBN6 386 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 MED31Q9Y3C7 131 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 NOX1Q9Y5S8 564 aa20.24■□□□□ 0.83
RNF39-201ENST00000244360 TGFBR3LH3BV60 316 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 LRRTM2O43300 516 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 RNH1P13489 461 aaKnown RBP20.23■□□□□ 0.83
RNF39-201ENST00000244360 ZNF24P17028 368 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 APEX1P27695 318 aaKnown RBP20.23■□□□□ 0.83
RNF39-201ENST00000244360 FZD5Q13467 585 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 SYT13Q7L8C5 426 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 ZFP41Q8N8Y5 198 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 GRPEL2Q8TAA5 225 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 SECISBP2Q96T21 854 aaKnown RBP20.23■□□□□ 0.83
RNF39-201ENST00000244360 TTYH2Q9BSA4 534 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 ZNF426Q9BUY5 554 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 TMEM27Q9HBJ8 222 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 RANGRFQ9HD47 186 aaPredicted RBP20.23■□□□□ 0.83
RNF39-201ENST00000244360 PAQR5Q9NXK6 330 aaPredicted RBP20.23■□□□□ 0.83
RNF39-201ENST00000244360 SIGLEC7Q9Y286 467 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 BLACEA4D250 179 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 SLC9B1P1A6NJY1 282 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 CHP2O43745 196 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 SRPX2O60687 465 aaPredicted RBP20.23■□□□□ 0.83
RNF39-201ENST00000244360 HPGDSO60760 199 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 SSTR4P31391 388 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 PLBD1Q6P4A8 553 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 ZNF322Q6U7Q0 402 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms