RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 FGFBP1Q14512 234 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 AGKQ53H12 422 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 ZNF628Q5EBL2 1059 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 CPTPQ5TA50 214 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 KRTCAP2Q8N6L1 136 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 FADS6Q8N9I5 356 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 EXOSC8Q96B26 276 aaKnown RBP12.33□□□□□ -0.44
DDX39A-201ENST00000242776 BTBD9Q96Q07 612 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 TACO1Q9BSH4 297 aaKnown RBP12.33□□□□□ -0.44
DDX39A-201ENST00000242776 TMEM204Q9BSN7 226 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 DUSP26Q9BV47 211 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 BHLHE41Q9C0J9 482 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-201ENST00000242776 ZNF175Q9Y473 711 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 A0A1W2PP18 115 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 PDPK1O15530 556 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 IGHV4-39P01824 125 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 PPP3CBP16298 524 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 S100A3P33764 101 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 LRRC74AQ0VAA2 488 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 KLF10Q13118 480 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 GUSBP1Q15486 140 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 PGS1Q32NB8 556 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 KRTAP24-1Q3LI83 254 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 MARCH3Q86UD3 253 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 VPS37AQ8NEZ2 397 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 OR7A2PQ8NGA2 310 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 OR8J2Q8NGG1 315 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 OR9I1Q8NGQ6 314 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 OR6K3Q8NGY3 331 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 ZFP28Q8NHY6 868 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 DUSP19Q8WTR2 217 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 TSPEARQ8WU66 669 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 SMAP2Q8WU79 429 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-201ENST00000242776 FBXW5Q969U6 566 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 S100PBPQ96BU1 408 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 ERP27Q96DN0 273 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 ZNF681Q96N22 645 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 BBS4Q96RK4 519 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 MYLK2Q9H1R3 596 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 SLC35C2Q9NQQ7 365 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 PLSCR4Q9NRQ2 329 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 FAM120CQ9NX05 1096 aaKnown RBP12.32□□□□□ -0.44
DDX39A-201ENST00000242776 TAS2R7Q9NYW3 318 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 VDAC3Q9Y277 283 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 RNF115Q9Y4L5 304 aa12.32□□□□□ -0.44
DDX39A-201ENST00000242776 YLPM1P49750 1951 aaKnown RBP12.31□□□□□ -0.44
DDX39A-201ENST00000242776 CCDC154A6NI56 674 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 OVOL3O00110 214 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 NR5A2O00482 541 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 CFLARO15519 480 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 SSX4O60224 188 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 F12P00748 615 aaPredicted RBP12.31□□□□□ -0.44
DDX39A-201ENST00000242776 PNLIPRP2P54317 469 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 FAM174BQ3ZCQ3 159 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 ANXA8L1Q5VT79 327 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 MSANTD1Q6ZTZ1 278 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 KBTBD8Q8NFY9 601 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 COQ8BQ96D53 544 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 SPDL1Q96EA4 605 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 TEX37Q96LM6 180 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 HS6ST2Q96MM7 605 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 VSTM2LQ96N03 204 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 CCDC106Q9BWC9 280 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 PTGES2Q9H7Z7 377 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 RMND5AQ9H871 391 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 ARMCX1Q9P291 453 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 FREM1Q5H8C1 2179 aa12.31□□□□□ -0.44
DDX39A-201ENST00000242776 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.3□□□□□ -0.442e-7■■■■■ 33
DDX39A-201ENST00000242776 CXCL13O43927 109 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 PGRP06401 933 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 CD3EP07766 207 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 FCGR2AP12318 317 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 IL12AP29459 219 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 MPIP34949 423 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 GABPB1Q06547 395 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-201ENST00000242776 ZNF385BQ569K4 471 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 SPANXN4Q5MJ08 99 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 FAM91A1Q658Y4 838 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 ANKRD26P1Q6NSI1 321 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 ADAM5Q6NVV9 412 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 BLOC1S3Q6QNY0 202 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 GGNQ86UU5 652 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 METTL25Q8N6Q8 603 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 OR7G2Q8NG99 324 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 SLC9A6Q92581 669 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 HTRA1Q92743 480 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 CMTM5Q96DZ9 223 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 C1GALT1C1Q96EU7 318 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 TMEM185BQ9H7F4 350 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 SDHAF3Q9NRP4 125 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 ACSS1Q9NUB1 689 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-201ENST00000242776 CADP27708 2225 aa12.3□□□□□ -0.44
DDX39A-201ENST00000242776 IGHV4-30-2A0A087WSY4 118 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 BBIP1A8MTZ0 92 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 C9JVG2 144 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 RNASET2O00584 256 aaKnown RBP12.29□□□□□ -0.44
DDX39A-201ENST00000242776 ANGPT2O15123 496 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 TMCC2O75069 709 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 BCAS2O75934 225 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-201ENST00000242776 DANCRP0C864 163 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms