RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ALDOCP09972 364 aaKnown RBP17.23■□□□□ 0.35
CLIP2-201ENST00000223398 CLDN17P56750 224 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 PPP2CBP62714 309 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 PPP2CAP67775 309 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 MRGPRX1Q96LB2 322 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 ZNF337Q9Y3M9 751 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 NRAPQ86VF7 1730 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 TRIM64BA6NI03 449 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 IGHG1P01857 330 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 TPOP07202 933 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 CTGFP29279 349 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 AKR1C2P52895 323 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 SELPLGQ14242 412 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 CDCP1Q9H5V8 836 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 MYO18AQ92614 2054 aaKnown RBP17.23■□□□□ 0.35
CLIP2-201ENST00000223398 TRAV18A0A075B6X5 111 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 INMT-MINDY4F8WBC2 141 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 DDAH2O95865 285 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 TACR3P29371 465 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 CXCR4P61073 352 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 MED25Q71SY5 747 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 OR10A2Q9H208 303 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 FOLH1BQ9HBA9 442 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 TMEM30AQ9NV96 361 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 TMEM181Q9P2C4 612 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 NXT1Q9UKK6 140 aaKnown RBP17.23■□□□□ 0.35
CLIP2-201ENST00000223398 LSSP48449 732 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 HENMT1Q5T8I9 393 aaKnown RBP17.23■□□□□ 0.35
CLIP2-201ENST00000223398 TEX19Q8NA77 164 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 ACOT11Q8WXI4 607 aaPredicted RBP17.23■□□□□ 0.35
CLIP2-201ENST00000223398 DDX31Q9H8H2 851 aaKnown RBP17.23■□□□□ 0.35
CLIP2-201ENST00000223398 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 H7C1C5 153 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 DPP4P27487 766 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 UGT2B10P36537 528 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 KIAA1024LP59773 190 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 LCN6P62502 163 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 NIPAL3Q6P499 406 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 MMP27Q9H306 513 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 TREM1Q9NP99 234 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 ACSS1Q9NUB1 689 aaPredicted RBP17.23■□□□□ 0.35
CLIP2-201ENST00000223398 B3GALT1Q9Y5Z6 326 aa17.23■□□□□ 0.35
CLIP2-201ENST00000223398 A0A1B0GVC2 190 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 H0YIV9 168 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 HCRTR1O43613 425 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 GCAP28676 217 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 DCDC5Q6ZRR9 648 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 SIRT6Q8N6T7 355 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 OR5J2Q8NH18 312 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 CCL4L1Q8NHW4 92 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 THOC3Q96J01 351 aaKnown RBP17.22■□□□□ 0.35
CLIP2-201ENST00000223398 MS4A8Q9BY19 250 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 MKRN2Q9H000 416 aaKnown RBP17.22■□□□□ 0.35
CLIP2-201ENST00000223398 AK6Q9Y3D8 172 aaKnown RBP17.22■□□□□ 0.35
CLIP2-201ENST00000223398 MAGED1Q9Y5V3 778 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-201ENST00000223398 CSNK1G2P78368 415 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 GNMTQ14749 295 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 OR5W2Q8NH69 310 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 SENP5Q96HI0 755 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-201ENST00000223398 UBXN10Q96LJ8 280 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 TREX2Q9BQ50 279 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-201ENST00000223398 PAPOLGQ9BWT3 736 aaKnown RBP17.22■□□□□ 0.35
CLIP2-201ENST00000223398 TMEM9Q9P0T7 183 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 ADAM29Q9UKF5 820 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 FOXD2O60548 495 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-201ENST00000223398 EDN3P14138 238 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 UGT2A3Q6UWM9 527 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 ZNF285Q96NJ3 590 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 MAN2C1Q9NTJ4 1040 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 OR5K3A6NET4 321 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 CLCA1A8K7I4 914 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 SEMA3BQ13214 749 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 CAMK2DQ13557 499 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 PLCXD3Q63HM9 321 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 Q6ZS52 159 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 GOLM1Q8NBJ4 401 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 OR2T11Q8NH01 316 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 TOMM40LQ969M1 308 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 IL37Q9NZH6 218 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 ABRACLQ9P1F3 81 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 RHBDD3Q9Y3P4 386 aa17.22■□□□□ 0.35
CLIP2-201ENST00000223398 A0A1B0GX78 115 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 ARGFXA6NJG6 315 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 MRPL58Q14197 206 aaKnown RBP17.21■□□□□ 0.35
CLIP2-201ENST00000223398 BCL7AQ4VC05 210 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 SFRP4Q6FHJ7 346 aaPredicted RBP17.21■□□□□ 0.35
CLIP2-201ENST00000223398 ASRGL1Q7L266 308 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 SLC16A14Q7RTX9 510 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 ZADH2Q8N4Q0 377 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 CSNK2A3Q8NEV1 391 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 GTF2H4Q92759 462 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 ALOX12BO75342 701 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 UTS2O95399 124 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 MYF5P13349 255 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 MAB21L1Q13394 359 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 ZNF704Q6ZNC4 412 aaPredicted RBP17.21■□□□□ 0.35
CLIP2-201ENST00000223398 ZNF431Q8TF32 576 aaPredicted RBP17.21■□□□□ 0.35
CLIP2-201ENST00000223398 PIGCQ92535 297 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 BIRC8Q96P09 236 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 SERPINA5P05154 406 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms