RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 GPR119Q8TDV5 335 aa16.46■□□□□ 0.23
CLN6-220ENST00000637450 CPNE4Q96A23 557 aaPredicted RBP16.46■□□□□ 0.23
CLN6-220ENST00000637450 PLPPR2Q96GM1 343 aa16.46■□□□□ 0.23
CLN6-220ENST00000637450 REXO5Q96IC2 774 aaKnown RBP16.46■□□□□ 0.23
CLN6-220ENST00000637450 HDHD5Q9BXW7 423 aa16.46■□□□□ 0.23
CLN6-220ENST00000637450 SRXN1Q9BYN0 137 aa16.46■□□□□ 0.23
CLN6-220ENST00000637450 ATAD3AQ9NVI7 634 aa16.46■□□□□ 0.23
CLN6-220ENST00000637450 FAF1Q9UNN5 650 aaPredicted RBP16.46■□□□□ 0.23
CLN6-220ENST00000637450 GPC6Q9Y625 555 aaPredicted RBP16.46■□□□□ 0.23
CLN6-220ENST00000637450 CSPG4Q6UVK1 2322 aa16.46■□□□□ 0.23
CLN6-220ENST00000637450 JMJD1CQ15652 2540 aa16.46■□□□□ 0.22
CLN6-220ENST00000637450 DSCAMO60469 2012 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 TLN2Q9Y4G6 2542 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 NPIPA5A0A0B4J1W7 369 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 NPIPA7E9PJI5 369 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 NPIPB9F8W1W9 429 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 H3BNH8 94 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 SMAD7O15105 426 aaKnown RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 TMCC2O75069 709 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 GCM2O75603 506 aaPredicted RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 C6orf47O95873 294 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 KRT16P08779 473 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 NPIPA8P0DM63 369 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 ARRB2P32121 409 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 SERPINB5P36952 375 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 RNF144AP50876 292 aaPredicted RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 ATP12AP54707 1039 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 SUMO3P55854 103 aaPredicted RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 TP53BP2Q13625 1128 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 RNPS1Q15287 305 aaKnown RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 TOMM34Q15785 309 aaPredicted RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 TMEM176BQ3YBM2 270 aaPredicted RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 TMEM201Q5SNT2 666 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 ZCCHC23Q6ZST2 131 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 NUFIP2Q7Z417 695 aaKnown RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 TUSC5Q8IXB3 177 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 RIMKLAQ8IXN7 391 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 RIBC1Q8N443 379 aaPredicted RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 KRTCAP2Q8N6L1 136 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 ZNF611Q8N823 705 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 STEAP2Q8NFT2 490 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 TCP10LQ8TDR4 215 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 ABHD3Q8WU67 409 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 PRPF18Q99633 342 aaKnown RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 C1orf50Q9BV19 199 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 GP6Q9HCN6 339 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 ZNF701Q9NV72 531 aaPredicted RBP16.45■□□□□ 0.22
CLN6-220ENST00000637450 ZDHHC2Q9UIJ5 367 aa16.45■□□□□ 0.22
CLN6-220ENST00000637450 GJE1A6NN92 205 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 GTPBP1O00178 669 aaKnown RBP16.44■□□□□ 0.22
CLN6-220ENST00000637450 HS3ST1O14792 307 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 SPAG7O75391 227 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 PRKD3O94806 890 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 NTN1O95631 604 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 NUDT14O95848 222 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 NUDT17P0C025 328 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 PRPS1L1P21108 318 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 ZNF844Q08AG5 666 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 SPDYE7PQ495Y7 208 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 TFAP2EQ6VUC0 442 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 FCRLAQ7L513 359 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 GABRG1Q8N1C3 465 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 FNDC5Q8NAU1 212 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 SFXN5Q8TD22 340 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 TMEM171Q8WVE6 324 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 S100PBPQ96BU1 408 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 MOAP1Q96BY2 351 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 ZNF524Q96C55 264 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 BHLHE41Q9C0J9 482 aaPredicted RBP16.44■□□□□ 0.22
CLN6-220ENST00000637450 L2HGDHQ9H9P8 463 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 KLHL13Q9P2N7 655 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 LGALS13Q9UHV8 139 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 DTNAQ9Y4J8 743 aa16.44■□□□□ 0.22
CLN6-220ENST00000637450 RAI1Q7Z5J4 1906 aaPredicted RBP16.44■□□□□ 0.22
CLN6-220ENST00000637450 USF3Q68DE3 2245 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 PRR14LQ5THK1 2151 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 CNOT4O95628 575 aaKnown RBP16.43■□□□□ 0.22
CLN6-220ENST00000637450 YES1P07947 543 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 PRKCAP17252 672 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 NDUFAF6Q330K2 333 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 SLC25A53Q5H9E4 307 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 MRGPRX4Q96LA9 322 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 DUSP26Q9BV47 211 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 CXorf56Q9H5V9 222 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 COQ10BQ9H8M1 238 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 ANKZF1Q9H8Y5 726 aa16.43■□□□□ 0.22
CLN6-220ENST00000637450 ETV2O00321 342 aaPredicted RBP16.42■□□□□ 0.22
CLN6-220ENST00000637450 EIF4E2O60573 245 aaKnown RBP16.42■□□□□ 0.22
CLN6-220ENST00000637450 SKAP2O75563 359 aaPredicted RBP16.42■□□□□ 0.22
CLN6-220ENST00000637450 C21orf58P58505 322 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 HBA1P69905 142 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 TSC22D1Q15714 1073 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 SFRP5Q5T4F7 317 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 ADAM5Q6NVV9 412 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 SLC43A2Q8N370 569 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 ATP6V1C2Q8NEY4 427 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 OR5W2Q8NH69 310 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 OR5AK3PQ8NH89 298 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 ZFP90Q8TF47 636 aa16.42■□□□□ 0.22
CLN6-220ENST00000637450 AKAP1Q92667 903 aaKnown RBP eCLIP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms