RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 UBQLN3Q9H347 655 aa11.52□□□□□ -0.57
PNKP-217ENST00000625216 METTL7AQ9H8H3 244 aa11.52□□□□□ -0.57
PNKP-217ENST00000625216 KCNJ16Q9NPI9 418 aa11.52□□□□□ -0.57
PNKP-217ENST00000625216 P2RX2Q9UBL9 471 aa11.52□□□□□ -0.57
PNKP-217ENST00000625216 ANGPT4Q9Y264 503 aa11.52□□□□□ -0.57
PNKP-217ENST00000625216 CREBBPQ92793 2442 aa11.52□□□□□ -0.57
PNKP-217ENST00000625216 DHRS12A0PJE2 317 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 OR6C70A6NIJ9 312 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 AHRRA9YTQ3 701 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 TMEM229AB2RXF0 380 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 GMNNO75496 209 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 OPN1SWP03999 348 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 GPIP06744 558 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 CHRM4P08173 479 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 TFPTP0C1Z6 253 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 GLI4P10075 376 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 ENDOUP21128 410 aaKnown RBP11.51□□□□□ -0.57
PNKP-217ENST00000625216 SLC7A1P30825 629 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 ANXA11P50995 505 aaKnown RBP11.51□□□□□ -0.57
PNKP-217ENST00000625216 TXNL4AP83876 142 aaKnown RBP11.51□□□□□ -0.57
PNKP-217ENST00000625216 C1orf185Q5T7R7 199 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 FNDC7Q5VTL7 733 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 ZFP1Q6P2D0 407 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 CCDC80Q76M96 950 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 SLC44A2Q8IWA5 706 aaPredicted RBP11.51□□□□□ -0.57
PNKP-217ENST00000625216 RPRMLQ8N4K4 120 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 OR10Q1Q8NGQ4 319 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 XAGE5Q8WWM1 108 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 SLC9A6Q92581 669 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 CDS1Q92903 461 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 HGDQ93099 445 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 TAMM41Q96BW9 452 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 DTNBP1Q96EV8 351 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 VSTM2LQ96N03 204 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 GNRHR2Q96P88 292 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 TREX2Q9BQ50 279 aaPredicted RBP11.51□□□□□ -0.57
PNKP-217ENST00000625216 DCLRE1BQ9H816 532 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 FOLH1BQ9HBA9 442 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 DCAF13Q9NV06 445 aaKnown RBP11.51□□□□□ -0.57
PNKP-217ENST00000625216 SPRR3Q9UBC9 169 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 C15orf41Q9Y2V0 281 aa11.51□□□□□ -0.57
PNKP-217ENST00000625216 ADGRG4Q8IZF6 3080 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 ENO4A6NNW6 628 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 C19orf84I3L1E1 186 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 ICOSLGO75144 302 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 TRAPPC6AO75865 159 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 NKX2-2O95096 273 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 CT45A8P0DMV1 189 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 CT45A9P0DMV2 189 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 ANPEPP15144 967 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 SSTR2P30874 369 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 KRT20P35900 424 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 EFR3AQ14156 821 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 NNATQ16517 81 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 CT45A2Q5DJT8 189 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 NHSL2Q5HYW2 709 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 RIPPLY2Q5TAB7 128 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 BICRALQ6AI39 1079 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 RTL6Q6ICC9 239 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 HEPHL1Q6MZM0 1159 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 REEP3Q6NUK4 255 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 NPSR1Q6W5P4 371 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 CBLL1Q75N03 491 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 CCDC71Q8IV32 467 aaPredicted RBP11.5□□□□□ -0.57
PNKP-217ENST00000625216 SLC30A8Q8IWU4 369 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 PM20D2Q8IYS1 436 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 CDRT4Q8N9R6 151 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 OR1J4Q8NGS1 313 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 ADAMTS15Q8TE58 950 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 C14orf79Q96F83 325 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 COL21A1Q96P44 957 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 LMF2Q9BU23 707 aaKnown RBP11.5□□□□□ -0.57
PNKP-217ENST00000625216 OSBPL11Q9BXB4 747 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 SLC6A15Q9H2J7 730 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 CCM2LQ9NUG4 571 aaPredicted RBP11.5□□□□□ -0.57
PNKP-217ENST00000625216 THUMPD1Q9NXG2 353 aaKnown RBP11.5□□□□□ -0.57
PNKP-217ENST00000625216 GIN1Q9NXP7 522 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 ALKBH4Q9NXW9 302 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 STX18Q9P2W9 335 aaKnown RBP11.5□□□□□ -0.57
PNKP-217ENST00000625216 FAM215AQ9Y5M1 114 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 MYO9AB2RTY4 2548 aa11.5□□□□□ -0.57
PNKP-217ENST00000625216 GXYLT2A0PJZ3 443 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 C5orf58C9J3I9 102 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 SNPHO15079 494 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 UGT2B11O75310 529 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 REM1O75628 298 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 CBR3O75828 277 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 PRKD3O94806 890 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 TOXO94900 526 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 PGM3O95394 542 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 MT-ND1P03886 318 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 ALOX5P09917 674 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 NR2F1P10589 423 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 UMPSP11172 480 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 PSMA4P25789 261 aaKnown RBP11.49□□□□□ -0.57
PNKP-217ENST00000625216 GCKP35557 465 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 PNLIPRP2P54317 469 aa11.49□□□□□ -0.57
PNKP-217ENST00000625216 PSG6Q00889 435 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms