RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PRRT2Q7Z6L0 340 aaPredicted RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 TMEM200AQ86VY9 491 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TPRA1Q86W33 373 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 KLHDC8BQ8IXV7 354 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 RGL4Q8IZJ4 473 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 SLC25A28Q96A46 364 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TEFMQ96QE5 360 aaKnown RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 FAIM2Q9BWQ8 316 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 CDT1Q9H211 546 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TMEM185BQ9H7F4 350 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 UNKLQ9H9P5 680 aaKnown RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 GDE1Q9NZC3 331 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 WWOXQ9NZC7 414 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 OR12D3Q9UGF7 316 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 CBLCQ9ULV8 474 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 KCTD3Q9Y597 815 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 NUP205Q92621 2012 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 SHROOM3Q8TF72 1996 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TMEM129A0AVI4 362 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 F5H5P2 479 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 J3KTA2 159 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 IFNGP01579 166 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 C1QCP02747 245 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 HLA-DQB2P05538 268 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 IQCF3P0C7M6 154 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 GKN3PP0CG01 181 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 OSMP13725 252 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 NME1P15531 152 aaKnown RBP7.4□□□□□ -1.23
VPS11-209ENST00000622309 MPGP29372 298 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 GJA5P36382 358 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 INSL4Q14641 139 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 TMEM132DQ14C87 1099 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 ALG11Q2TAA5 492 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 MARCH8Q5T0T0 291 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 CXorf57Q6NSI4 855 aaKnown RBP7.4□□□□□ -1.23
VPS11-209ENST00000622309 PAPD4Q6PIY7 484 aaKnown RBP7.4□□□□□ -1.23
VPS11-209ENST00000622309 BAIAP2L2Q6UXY1 529 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 OR2W3Q7Z3T1 314 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 OR2L5Q8NG80 312 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 OR11G2Q8NGC1 345 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 ING5Q8WYH8 240 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 KCTD12Q96CX2 325 aaKnown RBP7.4□□□□□ -1.23
VPS11-209ENST00000622309 SLC6A18Q96N87 628 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 DUSP26Q9BV47 211 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 MRPL37Q9BZE1 423 aaKnown RBP7.4□□□□□ -1.23
VPS11-209ENST00000622309 TPT1P8Q9HAU6 139 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 NOX3Q9HBY0 568 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 OPN4Q9UHM6 478 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 COLQQ9Y215 455 aaPredicted RBP7.4□□□□□ -1.23
VPS11-209ENST00000622309 TP53TG5Q9Y2B4 290 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 LCTP09848 1927 aa7.4□□□□□ -1.23
VPS11-209ENST00000622309 IRGMA1A4Y4 181 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 RFPL4AA6NLU0 287 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 MCIDASD6RGH6 385 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 RFPL4AL1F8VTS6 287 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 TMEM189-UBE2V1I3L0A0 370 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 OR7A17O14581 309 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 OR2T1O43869 369 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 B4GALT3O60512 393 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 TLR5O60602 858 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 NDUFS3O75489 264 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 UBL3O95164 117 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CNOT4O95628 575 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 RAB3DO95716 219 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 INHAP05111 366 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 SDHAP31040 664 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ADCYAP1R1P41586 468 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CTSOP43234 321 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 MMP15P51511 669 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 LUMP51884 338 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 DAOAP59103 153 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 IL2P60568 153 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 WDR5P61964 334 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 OCLNQ16625 522 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 PYY3Q5JQD4 70 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 MFSD14CQ5VZR4 134 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 HEPHL1Q6MZM0 1159 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CLEC9AQ6UXN8 241 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CEACAM20Q6UY09 585 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 TSEN54Q7Z6J9 526 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 SMAP2Q8WU79 429 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 MAL2Q969L2 176 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 FDXACB1Q9BRP7 624 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 ZNF471Q9BX82 626 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 SUCNR1Q9BXA5 334 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 SEC11CQ9BY50 192 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 PBX4Q9BYU1 374 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 DDIT4Q9NX09 232 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 RHCGQ9UBD6 479 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 FZD4Q9ULV1 537 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 KCNIP3Q9Y2W7 256 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 A0A1W2PPH5 198 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 MARCH11A6NNE9 402 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 M0QZ92 97 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 EFCAB14O75071 495 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 MT-ND4LP03901 98 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 TMIGD3P0DMS9 266 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 RPA2P15927 270 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 AGAP20933 346 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms