RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	GDNF	P39905	211 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	CBX5	P45973	191 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	PSMA6	P60900	246 aa	Known RBP	13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	ST3GAL3	Q11203	375 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	TSPAN31	Q12999	210 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	GNA13	Q14344	377 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	CDC73	Q6P1J9	531 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	CRIPAK	Q8N1N5	446 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	SLC39A11	Q8N1S5	342 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	NUS1	Q96E22	293 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	CAMK1G	Q96NX5	476 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	HMX1	Q9NP08	348 aa	Predicted RBP	13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	FRMPD3	Q5JV73	1810 aa		13.4	□□□□□ -0.26
SYNRG-231	ENST00000622045	LAMA2	P24043	3122 aa	Known RBP	13.4	□□□□□ -0.27
SYNRG-231	ENST00000622045	LRRN3	E7EW58	273 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	METAP1	P53582	386 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	RGS8	P57771	180 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	TGM3	Q08188	693 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	EIF2B5	Q13144	721 aa	Known RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZNF750	Q32MQ0	723 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	POGLUT1	Q8NBL1	392 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	SUN3	Q8TAQ9	357 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZNF671	Q8TAW3	534 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	OSTF1	Q92882	214 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	AMDHD1	Q96NU7	426 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	FAIM2	Q9BWQ8	316 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	LRRN3	Q9H3W5	708 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	HINT3	Q9NQE9	182 aa	Known RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	BABAM2	Q9NXR7	383 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ANXA7	P20073	488 aa	Known RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	NFYA	P23511	347 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	FNTB	P49356	437 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	VRK2	Q86Y07	508 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZG16B	Q96DA0	208 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	DAPL1	A0PJW8	107 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045		J3QLW9	94 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	MAGEB4	O15481	346 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	PIP5K1C	O60331	668 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZNF19	P17023	458 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	AADACL4	Q5VUY2	407 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	AMZ2	Q86W34	360 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	SLITRK4	Q8IW52	837 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	DCUN1D3	Q8IWE4	304 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	NRM	Q8IXM6	262 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	C17orf47	Q8NEP4	570 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR5W2	Q8NH69	310 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ORAI1	Q96D31	301 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZNF514	Q96K75	400 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	DPYSL5	Q9BPU6	564 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZNF649	Q9BS31	505 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	NTM	Q9P121	344 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	COPZ2	Q9P299	210 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZMAT5	Q9UDW3	170 aa	Known RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	LIPT1	Q9Y234	373 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	SPDEF	O95238	335 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	UBE2M	P61081	183 aa	Known RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	FZD5	Q13467	585 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	HLX	Q14774	488 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	OVCH2	Q7RTZ1	564 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZNF547	Q8IVP9	402 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	HERVK_113	Q902F9	699 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	FAM83C	Q9BQN1	747 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZCCHC4	Q9H5U6	513 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	CACYBP	Q9HB71	228 aa	Known RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	SEMA4G	Q9NTN9	838 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	ENTPD4	Q9Y227	616 aa		13.39	□□□□□ -0.27
SYNRG-231	ENST00000622045	CACNB4	O00305	520 aa	Predicted RBP	13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	EPPIN	O95925	133 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	ADRB1	P08588	477 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	UCHL1	P09936	223 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	RAB3A	P20336	220 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	F8A1	P23610	371 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	FCRLB	Q6BAA4	426 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	PAQR7	Q86WK9	346 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	NRSN1	Q8IZ57	195 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	BVES	Q8NE79	360 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR52B4	Q8NGK2	314 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	TCEAL4	Q96EI5	215 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	C12orf57	Q99622	126 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	GINS4	Q9BRT9	223 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR51V1	Q9H2C8	321 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	EPHX3	Q9H6B9	360 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045		A0A0C4DFX4	3053 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	TBX6	O95947	436 aa	Predicted RBP	13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	EFEMP2	O95967	443 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	FUT1	P19526	365 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	TAS2R38	P59533	333 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	ERVK-25	P63136	954 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR4C11	Q6IEV9	310 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	ACBD7	Q8N6N7	88 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR11G2	Q8NGC1	345 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	SAMD8	Q96LT4	415 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	SLC6A15	Q9H2J7	730 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	DPEP2	Q9H4A9	486 aa		13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	AK6	Q9Y3D8	172 aa	Known RBP	13.38	□□□□□ -0.27
SYNRG-231	ENST00000622045	IRAK3	Q9Y616	596 aa		13.38	□□□□□ -0.27

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