RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	GAS2L1	Q99501	681 aa	Predicted RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	ALG8	Q9BVK2	526 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	BABAM2	Q9NXR7	383 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	GRIP1	Q9Y3R0	1128 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	DAPL1	A0PJW8	107 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944		E9PI62	339 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	RNF13	O43567	381 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	RDH16	O75452	317 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CDC123	O75794	336 aa	Predicted RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	LYPD3	O95274	346 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	ATP1B1	P05026	303 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	GYPB	P06028	91 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	KIR2DL3	P43628	341 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CTBP2	P56545	445 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	FOXK2	Q01167	660 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	MGAT2	Q10469	447 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	ILF3	Q12906	894 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	ASAH1	Q13510	395 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	TMEM44	Q2T9K0	475 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	IDNK	Q5T6J7	187 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	NIPAL3	Q6P499	406 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CDK20	Q8IZL9	346 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CA13	Q8N1Q1	262 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	SLC37A3	Q8NCC5	494 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	OR52R1	Q8NGF1	315 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	OR52N1	Q8NH53	320 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	RPLP0P6	Q8NHW5	317 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CHAC2	Q8WUX2	184 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	DNAJA4	Q8WW22	397 aa	Predicted RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	SMAD5	Q99717	465 aa	Known RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	TIMP4	Q99727	224 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	TTTY10	Q9BZA0	68 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	PPIL3	Q9H2H8	161 aa	Known RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	LYRM4	Q9HD34	91 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	MEPE	Q9NQ76	525 aa	Predicted RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	CLEC1B	Q9P126	229 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	NUFIP1	Q9UHK0	495 aa	Known RBP	10.38	□□□□□ -0.75
TP53-223	ENST00000618944	SPACA6	W5XKT8	324 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944	MYO15A	Q9UKN7	3530 aa		10.38	□□□□□ -0.75
TP53-223	ENST00000618944		A0A1B0GVC2	190 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	TCRBV21S2A2	A0A5A6	115 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944		A6NIN4	97 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	C2orf74	A8MZ97	194 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	FAM25A	B3EWG3	89 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	FAM25C	B3EWG5	89 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	FAM25G	B3EWG6	89 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944		B4DXG7	233 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944		J3QRE1	110 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	NOS3	P29474	1203 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	PPP3R1	P63098	170 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	POU6F2	P78424	691 aa	Predicted RBP	10.37	□□□□□ -0.75
TP53-223	ENST00000618944	PLAUR	Q03405	335 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	SLC3A1	Q07837	685 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	ERV3-1	Q14264	604 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	BCL2A1	Q16548	175 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	FAM27D1	Q5T7N8	215 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	PRPF38B	Q5VTL8	546 aa	Known RBP	10.37	□□□□□ -0.75
TP53-223	ENST00000618944	ARL9	Q6T311	187 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	GALNT6	Q8NCL4	622 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	C19orf18	Q8NEA5	215 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	TOR1AIP2	Q8NFQ8	470 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	OR9A4	Q8NGU2	314 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	HMGB4	Q8WW32	186 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	ST6GAL2	Q96JF0	529 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	CCDC3	Q9BQI4	270 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	RNF32	Q9H0A6	362 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	S1PR5	Q9H228	398 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	IL21R	Q9HBE5	538 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	FAM60A	Q9NP50	221 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	B3GAT2	Q9NPZ5	323 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	BOLA1	Q9Y3E2	137 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	PIAS3	Q9Y6X2	628 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	CEP290	O15078	2479 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	PRUNE2	Q8WUY3	3088 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	PRR23D1	E9PI22	279 aa	Predicted RBP	10.37	□□□□□ -0.75
TP53-223	ENST00000618944	GTPBP1	O00178	669 aa	Known RBP	10.37	□□□□□ -0.75
TP53-223	ENST00000618944	IDH3B	O43837	385 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	OR10H2	O60403	315 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	BRINP1	O60477	761 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	PLOD3	O60568	738 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	ADAM11	O75078	769 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	PPP1R3D	O95685	299 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.37	□□□□□ -0.75
TP53-223	ENST00000618944	CHRNB1	P11230	501 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	RPS4Y1	P22090	263 aa	Known RBP	10.37	□□□□□ -0.75
TP53-223	ENST00000618944	SHC1	P29353	583 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	BMP8B	P34820	402 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	EVX1	P49640	407 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	EMD	P50402	254 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	HCCS	P53701	268 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	AMZ1	Q400G9	498 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	LCN1P1	Q5VSP4	162 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	TRIQK	Q629K1	86 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	IL20RB	Q6UXL0	311 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	NANOGNB	Q7Z5D8	188 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	BMP8A	Q7Z5Y6	402 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	NR2C2AP	Q86WQ0	139 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	GID4	Q8IVV7	300 aa		10.37	□□□□□ -0.75
TP53-223	ENST00000618944	SLC22A18AS	Q8N1D0	253 aa		10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms