RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZIC2O95409 532 aaPredicted RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 BCL10O95999 233 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 CST1P01037 141 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 IGKV1D-16P01601 117 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ALPLP05186 524 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PGRP06401 933 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ABCB1P08183 1280 aaPredicted RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ALOX5P09917 674 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 FBXO45P0C2W1 286 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 CCL3P10147 92 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 IMPDH2P12268 514 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ATP6V1B2P21281 511 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 CRHBPP24387 322 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 NTSP30990 170 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 LCN1P31025 176 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 S100A3P33764 101 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PTGER4P35408 488 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 KIR3DL1P43629 444 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 MAN2A2P49641 1150 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ERFP50548 548 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PSMD7P51665 324 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 MANFP55145 182 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 EEF1A1P68104 462 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PSG6Q00889 435 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PMP22Q01453 160 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 OC90Q02509 493 aaPredicted RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 RIPPLY1Q0D2K3 151 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 VEZF1Q14119 521 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF846Q147U1 533 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 MLC1Q15049 377 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 TUSC1Q2TAM9 212 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF791Q3KP31 576 aaPredicted RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PAGE3Q5JUK9 113 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 RNFT1Q5M7Z0 435 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 C6orf141Q5SZD1 244 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 EEF1A1P5Q5VTE0 462 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 BICRALQ6AI39 1079 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 TMEM211Q6ICI0 200 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SPINK14Q6IE38 97 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ARHGAP11AQ6P4F7 1023 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 RTL4Q6ZR62 310 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 OLIG3Q7RTU3 272 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PIWIL3Q7Z3Z3 882 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 R3HCC1LQ7Z5L2 792 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ZAR1Q86SH2 424 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF554Q86TJ5 538 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SERPINA11Q86U17 422 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SLC22A16Q86VW1 577 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 LSRQ86X29 649 aaPredicted RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ANKRD13BQ86YJ7 626 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 CLVS1Q8IUQ0 354 aaPredicted RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 EGFL6Q8IUX8 553 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 MSRB3Q8IXL7 192 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PRR22Q8IZ63 422 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 CYP4Z2PQ8N1L4 340 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 C10orf111Q8N326 155 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SVOPQ8N4V2 548 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 CISD2Q8N5K1 135 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SMYD1Q8NB12 490 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 FAM156AQ8NDB6 213 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 OR10G3Q8NGC4 313 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 FBXO30Q8TB52 745 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PHF10Q8WUB8 498 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 CYGBQ8WWM9 190 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ASB15Q8WXK1 588 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 OR5P2Q8WZ92 322 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 FCGR1BQ92637 280 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ITFG2Q969R8 447 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 C12orf43Q96C57 262 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 HSPBAP1Q96EW2 488 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ZBED6CLQ96FA7 236 aaPredicted RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PYURFQ96I23 114 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 REXO5Q96IC2 774 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF583Q96ND8 569 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 TAAR6Q96RI8 345 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 APOL4Q9BPW4 351 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 FAM173AQ9BQD7 235 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 THUMPD3Q9BV44 507 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 WDR12Q9GZL7 423 aaKnown RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SIAEQ9HAT2 523 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 HMG20AQ9NP66 347 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 CHST11Q9NPF2 352 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 GIMAP4Q9NUV9 329 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ASF1BQ9NVP2 202 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 GPATCH2Q9NW75 528 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 FBXO34Q9NWN3 711 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 FAM118AQ9NWS6 357 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 HPF1Q9NWY4 346 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SLAMF8Q9P0V8 285 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SEC14L3Q9UDX4 400 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 EGFL7Q9UHF1 273 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF835Q9Y2P0 537 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 CCDC168Q8NDH2 2452 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SPG11Q96JI7 2443 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 TRBV5-3A0A0A0MS03 114 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 LOC100130705A0A1B0GUX0 176 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 C2orf92A0A1B0GVN3 265 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ISPDA4D126 451 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 FRG2CA6NGY1 282 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 E9PLN8 166 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms