RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 ACSS1Q9NUB1 689 aaPredicted RBP18.91■□□□□ 0.62
CTDP1-208ENST00000613122 PRDM4Q9UKN5 801 aa18.91■□□□□ 0.62
CTDP1-208ENST00000613122 TRAV18A0A075B6X5 111 aa18.91■□□□□ 0.62
CTDP1-208ENST00000613122 GPX3P22352 226 aa18.91■□□□□ 0.62
CTDP1-208ENST00000613122 ENTPD8Q5MY95 495 aa18.91■□□□□ 0.62
CTDP1-208ENST00000613122 PRSS48Q7RTY5 328 aa18.91■□□□□ 0.62
CTDP1-208ENST00000613122 PAPD5Q8NDF8 572 aaKnown RBP18.91■□□□□ 0.62
CTDP1-208ENST00000613122 SENP5Q96HI0 755 aaPredicted RBP18.91■□□□□ 0.62
CTDP1-208ENST00000613122 TREX2Q9BQ50 279 aaPredicted RBP18.91■□□□□ 0.62
CTDP1-208ENST00000613122 C1QTNF2Q9BXJ5 285 aa18.91■□□□□ 0.62
CTDP1-208ENST00000613122 OBP2BQ9NPH6 170 aa18.91■□□□□ 0.62
CTDP1-208ENST00000613122 MYEF2Q9P2K5 600 aaKnown RBP18.91■□□□□ 0.62
CTDP1-208ENST00000613122 CNOT11Q9UKZ1 510 aaKnown RBP18.91■□□□□ 0.62
CTDP1-208ENST00000613122 OTOL1A6NHN0 477 aaPredicted RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 M0R233 179 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 CHRM4P08173 479 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 BMP1P13497 986 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 POLR2HP52434 150 aaKnown RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 OR1Q1Q15612 314 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 ZNF181Q2M3W8 571 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 TMEM52BQ4KMG9 183 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 MARVELD2Q8N4S9 558 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 C22orf15Q8WYQ4 148 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 WDR83Q9BRX9 315 aaKnown RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 SLC6A17Q9H1V8 727 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 FGF21Q9NSA1 209 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 VAPAQ9P0L0 249 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 B3GNT3Q9Y2A9 372 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 DCDC2BA2VCK2 349 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 NPR2P20594 1047 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 ERP29P30040 261 aaKnown RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 IST1P53990 364 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 POU3F1Q03052 451 aaPredicted RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 METTL4Q8N3J2 472 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 ACOT11Q8WXI4 607 aaPredicted RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 MAN2C1Q9NTJ4 1040 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 PLEKHJ1Q9NW61 149 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 CARD8Q9Y2G2 431 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 MAGED1Q9Y5V3 778 aaPredicted RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 SLC16A7O60669 478 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 MMP12P39900 470 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 GPR18Q14330 331 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 DUSP6Q16828 381 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 EIF2S3LQ2VIR3 472 aaKnown RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 ZNF417Q8TAU3 575 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 SEMA6CQ9H3T2 930 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 R3HDMLQ9H3Y0 253 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 C1GALT1Q9NS00 363 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 SPHK1Q9NYA1 384 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 F5H0A9 414 aaPredicted RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 PLCXD3Q63HM9 321 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 OR13H1Q8NG92 308 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 ATOH8Q96SQ7 321 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 ABCG5Q9H222 651 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 DCAF13Q9NV06 445 aaKnown RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 PGAP2Q9UHJ9 254 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 HSPB11Q9Y547 144 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 ITGBL1O95965 494 aaPredicted RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 WNT4P56705 351 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 GSG1LQ6UXU4 331 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 CMTM1Q8IZ96 169 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 VSX1Q9NZR4 365 aaPredicted RBP18.9■□□□□ 0.62
CTDP1-208ENST00000613122 EMC9Q9Y3B6 208 aa18.9■□□□□ 0.62
CTDP1-208ENST00000613122 CDK2P24941 298 aa18.89■□□□□ 0.62
CTDP1-208ENST00000613122 KIAA0907Q7Z7F0 614 aaPredicted RBP18.89■□□□□ 0.62
CTDP1-208ENST00000613122 MGAT4CQ9UBM8 478 aa18.89■□□□□ 0.62
CTDP1-208ENST00000613122 PADI1Q9ULC6 663 aa18.89■□□□□ 0.62
CTDP1-208ENST00000613122 TLCD2A6NGC4 264 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 KCNJ10P78508 379 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 C7orf34Q96L11 122 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 CD93Q9NPY3 652 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 OR2S2Q9NQN1 319 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 TRAV27A0A087WT01 109 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 ZNF264O43296 627 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 IFNA1P01562 189 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 CHRNB4P30926 498 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 TAZQ16635 292 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 COL28A1Q2UY09 1125 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 C9orf135Q5VTT2 229 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 LINC00696Q6ZRV3 163 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 PXKQ7Z7A4 578 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 RNF175Q8N4F7 328 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 AMDHD1Q96NU7 426 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 CLMPQ9H6B4 373 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 B3GALT1Q9Y5Z6 326 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 ARNTLO00327 626 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 FNTBP49356 437 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 ZNF81P51508 661 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 FXYD4P59646 89 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 GPR50Q13585 617 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 TMEM176BQ3YBM2 270 aaPredicted RBP18.89■□□□□ 0.61
CTDP1-208ENST00000613122 TMEM244Q5VVB8 128 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 PGBD5Q8N414 524 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 RAB39BQ96DA2 213 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 DNAJB6O75190 326 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 BMP2P12643 396 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 ADARB1P78563 741 aaKnown RBP18.89■□□□□ 0.61
CTDP1-208ENST00000613122 NTRK2Q16620 822 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 PRAMEF20Q5VT98 475 aa18.89■□□□□ 0.61
CTDP1-208ENST00000613122 GPR139Q6DWJ6 353 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms