RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 OR6C70A6NIJ9 312 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 H3BN98 237 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 CHP2O43745 196 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 SOX14O95416 240 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 ANGPTL1O95841 491 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 TP53P04637 393 aaPredicted RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 FOLR3P41439 243 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 RPL5P46777 297 aaKnown RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 HLCSP50747 726 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 CXCR4P61073 352 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 WDR88Q6ZMY6 472 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 TIPARPQ7Z3E1 657 aaKnown RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 WDR36Q8NI36 951 aaKnown RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 RNF217Q8TC41 542 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 TMEM239Q8WW34 195 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 ZNF566Q969W8 418 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 FAM46AQ96IP4 442 aaKnown RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 HS6ST2Q96MM7 605 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 ZNF700Q9H0M5 742 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 RASSF1Q9NS23 344 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 BLOC1S6Q9UL45 172 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 RNF6Q9Y252 685 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 EP300Q09472 2414 aaPredicted RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 IGHV1-45A0A0A0MS14 117 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 A0A1W2PQD3 144 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 TMEM200CA6NKL6 621 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 ALG1L2C9J202 215 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 ZNF264O43296 627 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 IGHEP01854 428 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 CCDC159P0C7I6 412 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 FPR3P25089 353 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 TMEM236Q5W0B7 351 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 ULK3Q6PHR2 472 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 C16orf47Q6ZP98 133 aaPredicted RBP19.8■□□□□ 0.76
USP6NL-204ENST00000606752 RHOXF1Q8NHV9 184 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 GRHL3Q8TE85 626 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 THAP3Q8WTV1 239 aaPredicted RBP19.8■□□□□ 0.76
USP6NL-204ENST00000606752 MPP4Q96JB8 637 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 ZBTB20Q9HC78 741 aaPredicted RBP19.8■□□□□ 0.76
USP6NL-204ENST00000606752 CNIH4Q9P003 139 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 RPS6KB2Q9UBS0 482 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 HS3ST3B1Q9Y662 390 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 KNTC1P50748 2209 aa19.8■□□□□ 0.76
USP6NL-204ENST00000606752 TRIM64CA6NLI5 447 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 SLC1A7O00341 560 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 PPM1BO75688 479 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 IGFBP1P08833 259 aaPredicted RBP19.79■□□□□ 0.76
USP6NL-204ENST00000606752 LINGO3P0C6S8 592 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 TCN2P20062 427 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 ENDOUP21128 410 aaKnown RBP19.79■□□□□ 0.76
USP6NL-204ENST00000606752 CDC42P60953 191 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 COPZ1P61923 177 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 SKP2Q13309 424 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 ALG10BQ5I7T1 473 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 MEX3DQ86XN8 651 aaKnown RBP19.79■□□□□ 0.76
USP6NL-204ENST00000606752 CADM2Q8N3J6 435 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 POGLUT1Q8NBL1 392 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 DEFB124Q8NES8 71 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 BPIFB6Q8NFQ5 453 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 IMPAD1Q9NX62 359 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 AASSQ9UDR5 926 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 CARD8Q9Y2G2 431 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 WWP2O00308 870 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 KLF4O43474 513 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 PIP5K1CO60331 668 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 RAB40ALP0C0E4 278 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 EEF1B2P24534 225 aaKnown RBP19.79■□□□□ 0.76
USP6NL-204ENST00000606752 STAT5AP42229 794 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 NR1H2P55055 460 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 EFR3AQ14156 821 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 BTBD16Q32M84 506 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 SLX4IPQ5VYV7 408 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 RASSF6Q6ZTQ3 369 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 ELP5Q8TE02 316 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 TBL1XR1Q9BZK7 514 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 LAT2Q9GZY6 243 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 MYOTQ9UBF9 498 aa19.79■□□□□ 0.76
USP6NL-204ENST00000606752 WBP4O75554 376 aaKnown RBP19.78■□□□□ 0.76
USP6NL-204ENST00000606752 DKK1O94907 266 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 OR6B1O95007 311 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 COX6A1P12074 109 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 NAGAP17050 411 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 FMO3P31513 532 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 RBM34P42696 430 aaKnown RBP19.78■□□□□ 0.76
USP6NL-204ENST00000606752 EXT1Q16394 746 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 C3orf38Q5JPI3 329 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 KIRREL2Q6UWL6 708 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 CT55Q8WUE5 264 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 DNAJA4Q8WW22 397 aaPredicted RBP19.78■□□□□ 0.76
USP6NL-204ENST00000606752 IMMP1LQ96LU5 166 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 ZNF426Q9BUY5 554 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 ZNF226Q9NYT6 803 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 SELENONQ9NZV5 590 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 MED31Q9Y3C7 131 aa19.78■□□□□ 0.76
USP6NL-204ENST00000606752 OIP5O43482 229 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 NDUFB5O43674 189 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 FADS1O60427 444 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 ZNF354AO60765 605 aaPredicted RBP19.77■□□□□ 0.76
USP6NL-204ENST00000606752 NADKO95544 446 aaPredicted RBP19.77■□□□□ 0.76
USP6NL-204ENST00000606752 GABARAPL2P60520 117 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms