RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 CBX7O95931 251 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 HEXBP07686 556 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 CYC1P08574 325 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 NR2F1P10589 423 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 CEACAM1P13688 526 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 MAN2A2P49641 1150 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 PGDP52209 483 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 NHLH1Q02575 133 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 FUT7Q11130 342 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 EXOSC7Q15024 291 aaKnown RBP10.82□□□□□ -0.68
VRK3-223ENST00000601341 ATAD3BQ5T9A4 648 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 TMEM236Q5W0B7 351 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 LCN10Q6JVE6 187 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 MRPL14Q6P1L8 145 aaKnown RBP10.82□□□□□ -0.68
VRK3-223ENST00000601341 PGBD2Q6P3X8 592 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 SHISA6Q6ZSJ9 500 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 ZBTB46Q86UZ6 589 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 ATCAYQ86WG3 371 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 PROKR2Q8NFJ6 384 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 OR52R1Q8NGF1 315 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 PTPMT1Q8WUK0 201 aaPredicted RBP10.82□□□□□ -0.68
VRK3-223ENST00000601341 METTL21AQ8WXB1 218 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 SLC9A6Q92581 669 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 OR7D2Q96RA2 312 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 CNPPD1Q9BV87 410 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 CDADC1Q9BWV3 514 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 PINK1Q9BXM7 581 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 POLDIP3Q9BY77 421 aaKnown RBP10.82□□□□□ -0.68
VRK3-223ENST00000601341 POLR2J3Q9H1A7 115 aaKnown RBP10.82□□□□□ -0.68
VRK3-223ENST00000601341 WDR54Q9H977 334 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 LIPT1Q9Y234 373 aa10.82□□□□□ -0.68
VRK3-223ENST00000601341 COL27A1Q8IZC6 1860 aaPredicted RBP10.81□□□□□ -0.68
VRK3-223ENST00000601341 SLC28A2O43868 658 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 OR10H3O60404 316 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 PRAMEF2O60811 474 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 SEMA7AO75326 666 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 LGI1O95970 557 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 PTTG1O95997 202 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 IFNGR2P38484 337 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 GSSP48637 474 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 PSMD7P51665 324 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 NUDT6P53370 316 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 EMP2P54851 167 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 IFITM3Q01628 133 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 SEC23BQ15437 767 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 ENTPD8Q5MY95 495 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 ZNF517Q6ZMY9 492 aaPredicted RBP10.81□□□□□ -0.68
VRK3-223ENST00000601341 TMPRSS12Q86WS5 348 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 ZBTB8BQ8NAP8 495 aaPredicted RBP10.81□□□□□ -0.68
VRK3-223ENST00000601341 SLC16A11Q8NCK7 471 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 TOR1AIP2Q8NFQ8 470 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 OR7G1Q8NGA0 311 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 SLC7A13Q8TCU3 470 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 DAZLQ92904 295 aaKnown RBP10.81□□□□□ -0.68
VRK3-223ENST00000601341 TMEM80Q96HE8 168 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 SENP5Q96HI0 755 aaPredicted RBP10.81□□□□□ -0.68
VRK3-223ENST00000601341 PRRC1Q96M27 445 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 SPSB2Q99619 263 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 MND1Q9BWT6 205 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 PIGUQ9H490 435 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 AKIRIN1Q9H9L7 192 aaPredicted RBP10.81□□□□□ -0.68
VRK3-223ENST00000601341 AMBNQ9NP70 447 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 DUSP22Q9NRW4 184 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 MRPS18AQ9NVS2 196 aaKnown RBP10.81□□□□□ -0.68
VRK3-223ENST00000601341 CRNNQ9UBG3 495 aaPredicted RBP10.81□□□□□ -0.68
VRK3-223ENST00000601341 ITGB1BP2Q9UKP3 347 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 A4GNTQ9UNA3 340 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 ERVK-19Q9WJR5 959 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 LSM2Q9Y333 95 aaKnown RBP10.81□□□□□ -0.68
VRK3-223ENST00000601341 GVINP1Q7Z2Y8 2422 aa10.81□□□□□ -0.68
VRK3-223ENST00000601341 A0A1W2PNU3 283 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 SNTNA6NMZ2 147 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 LOC110117498-PIK3R3F6TDL0 507 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 ALOX12BO75342 701 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 CD63P08962 238 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 CCNYL3P0C7X3 344 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 POU2F1P14859 743 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 SSTR4P31391 388 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 EFNA3P52797 238 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 C1DQ13901 141 aaKnown RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 ZNHIT3Q15649 155 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 RPS26P11Q5JNZ5 115 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 C3orf38Q5JPI3 329 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 EXOSC6Q5RKV6 272 aaKnown RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 C1orf94Q6P1W5 598 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 FAM199XQ6PEV8 388 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 C6orf15Q6UXA7 325 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 MRGPREQ86SM8 312 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 OR14A16Q8NHC5 309 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 PIK3R3Q92569 461 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 OTUB1Q96FW1 271 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 SLC35A4Q96G79 324 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 ART5Q96L15 291 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 STACQ99469 402 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 CRB3Q9BUF7 120 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 CCDC32Q9BV29 185 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 FNDC11Q9BVV2 318 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 OR10A5Q9H207 317 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 ISYNA1Q9NPH2 558 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 PRODH2Q9UF12 536 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms