RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PRAMEF26H0Y7S4 382 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ARHGEF9O43307 516 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 IGHV4-34P06331 123 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 GFERP55789 205 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 CDK5Q00535 292 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 BNC1Q01954 994 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 EIF2B5Q13144 721 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNHIT3Q15649 155 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 RNF44Q7L0R7 432 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 PRR22Q8IZ63 422 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF619Q8N2I2 560 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 RIT1Q92963 219 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 EFHD2Q96C19 240 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 KCTD7Q96MP8 289 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 GAL3ST4Q96RP7 486 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 HCAR1Q9BXC0 346 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 UBQLN3Q9H347 655 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 TMEM27Q9HBJ8 222 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 PNO1Q9NRX1 252 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 RPS6KB2Q9UBS0 482 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 FBXO9Q9UK97 447 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ERVK-19Q9WJR5 959 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 DTX4Q9Y2E6 619 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 CDC14CA4D256 554 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 FABP12A6NFH5 140 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 UNC119BA6NIH7 251 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAM25AB3EWG3 89 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAM25CB3EWG5 89 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAM25GB3EWG6 89 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 GRPRP30550 384 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 PRKAR1BP31321 381 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ACVR1BP36896 505 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 NAA10P41227 235 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 SLC1A3P43003 542 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 RABIFP47224 123 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 FOXL2P58012 376 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 MRPS21P82921 87 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF57Q68EA5 555 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 IL20RBQ6UXL0 311 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 THSD4Q6ZMP0 1018 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 MCATQ8IVS2 390 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAM98AQ8NCA5 519 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 FYTTD1Q96QD9 318 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ARHGDIGQ99819 225 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 SIDT1Q9NXL6 827 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 MMP17Q9ULZ9 603 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 WDFY4Q6ZS81 3184 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 ANKRD34BA5PLL1 514 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 TRAPPC13A5PLN9 417 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 J3QLW9 94 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 GALR3O60755 368 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 HPGDP15428 266 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF19P17023 458 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 EMDP50402 254 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAM27D1Q5T7N8 215 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAAH2Q6GMR7 532 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 PAMR1Q6UXH9 720 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 RPTNQ6XPR3 784 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 SHISA6Q6ZSJ9 500 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 RASSF6Q6ZTQ3 369 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 MBOAT2Q6ZWT7 520 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 OAFQ86UD1 273 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 CA13Q8N1Q1 262 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 OR2L13Q8N349 312 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 ARL14Q8N4G2 192 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 SIRT6Q8N6T7 355 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 ASCC1Q8N9N2 400 aaKnown RBP10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 MINDY2Q8NBR6 621 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 FLVCR1-AS1Q8TAF5 88 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 BPIFA2Q96DR5 249 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 LMF1Q96S06 567 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 PIGUQ9H490 435 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 DIMT1Q9UNQ2 313 aaKnown RBP10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 GSTK1Q9Y2Q3 226 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZDBF2Q9HCK1 2354 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 DAPL1A0PJW8 107 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 BMP8BP34820 402 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 OR1D4P47884 311 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 ARL4DP49703 201 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 FABP5Q01469 135 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 MLLT11Q13015 90 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 FZD2Q14332 565 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 OCLNQ16625 522 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF620Q6ZNG0 422 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 BMP8AQ7Z5Y6 402 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 SAMD14Q8IZD0 417 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 CDRT4Q8N9R6 151 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 OR4K13Q8NH42 304 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 PCNPQ8WW12 178 aaKnown RBP10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 RFKQ969G6 155 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 CTRCQ99895 268 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF559Q9BR84 538 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 FN3KQ9H479 309 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 UCKL1Q9NWZ5 548 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 PILRAQ9UKJ1 303 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 C19orf53Q9UNZ5 99 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 MED31Q9Y3C7 131 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 FANCMQ8IYD8 2048 aa10.69□□□□□ -0.7
ARHGEF1-220ENST00000600274 A6NCN8 305 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms