RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	TUSC5	Q8IXB3	177 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	GABRG1	Q8N1C3	465 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	KRTCAP2	Q8N6L1	136 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	ZNF611	Q8N823	705 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	ZNF614	Q8N883	585 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	ZNF527	Q8NB42	609 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	MAPK1IP1L	Q8NDC0	245 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	STEAP2	Q8NFT2	490 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	OR2W6P	Q8NHA6	318 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	LILRB1	Q8NHL6	650 aa	Predicted RBP	9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	RFWD2	Q8NHY2	731 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	NEUROG1	Q92886	237 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	CPNE4	Q96A23	557 aa	Predicted RBP	9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	REXO5	Q96IC2	774 aa	Known RBP	9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	C3orf30	Q96M34	536 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	STAC	Q99469	402 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	TACO1	Q9BSH4	297 aa	Known RBP	9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	ACTRT3	Q9BYD9	372 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	CXorf36	Q9H7Y0	433 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	COQ10B	Q9H8M1	238 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	ANKZF1	Q9H8Y5	726 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	FANCF	Q9NPI8	374 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	GPATCH2	Q9NW75	528 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	KLHL13	Q9P2N7	655 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	SLC17A7	Q9P2U7	560 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	MID2	Q9UJV3	735 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	ICAM5	Q9UMF0	924 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	LAMP3	Q9UQV4	416 aa		9.37	□□□□□ -0.91
LSM4-205	ENST00000597776	HIVEP2	P31629	2446 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776		A0A1W2PNR3	127 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	TLDC2	A0PJX2	215 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	TMEM114	B3SHH9	223 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	CLOCK	O15516	846 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	SLU7	O95391	586 aa	Known RBP	9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	HSPA4L	O95757	839 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	SOD3	P08294	240 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	FGF4	P08620	206 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	PABPC4L	P0CB38	370 aa	Known RBP	9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	PRKCA	P17252	672 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	ENPP1	P22413	925 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	IL32	P24001	234 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	ARRB2	P32121	409 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	CCT3	P49368	545 aa	Known RBP	9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	P2RX1	P51575	399 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	RPS26	P62854	115 aa	Known RBP	9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	PPP2R2B	Q00005	443 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	KRTAP1-1	Q07627	177 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	TNK1	Q13470	666 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	RNPS1	Q15287	305 aa	Known RBP	9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	TAB1	Q15750	504 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	SPDYE7P	Q495Y7	208 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	XKR7	Q5GH72	579 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	GTF2IRD2B	Q6EKJ0	949 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	FCRLA	Q7L513	359 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	MTERF4	Q7Z6M4	381 aa	Known RBP	9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	GTF2IRD2	Q86UP8	949 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	TMCO5A	Q8N6Q1	288 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	BANP	Q8N9N5	519 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	OR5D16	Q8NGK9	328 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	OR5AK3P	Q8NH89	298 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	GPR119	Q8TDV5	335 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	ADAMTS15	Q8TE58	950 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	ZFP90	Q8TF47	636 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	OR5P2	Q8WZ92	322 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	APOPT1	Q96IL0	206 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	PPP3R2	Q96LZ3	170 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	OR10A4	Q9H209	315 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	PPCS	Q9HAB8	311 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	TIGAR	Q9NQ88	270 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	FAF1	Q9UNN5	650 aa	Predicted RBP	9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	RNF115	Q9Y4L5	304 aa		9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	GPC6	Q9Y625	555 aa	Predicted RBP	9.36	□□□□□ -0.91
LSM4-205	ENST00000597776	FBN1	P35555	2871 aa	Known RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	GJE1	A6NN92	205 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ZNF814	B7Z6K7	855 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776		C9JVG2	144 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	NPIPB9	F8W1W9	429 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776		H3BNH8	94 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	GTPBP1	O00178	669 aa	Known RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	CFLAR	O15519	480 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	NPHS1	O60500	1241 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	SPAG7	O75391	227 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	SKAP2	O75563	359 aa	Predicted RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	PRKD3	O94806	890 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ADA	P00813	363 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	DDX5	P17844	614 aa	Known RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	EDNRA	P25101	427 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ADH6	P28332	368 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	MAPK1	P28482	360 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	SLC7A1	P30825	629 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	SOAT1	P35610	550 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	CCR4	P51679	360 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ATP12A	P54707	1039 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	SUMO3	P55854	103 aa	Predicted RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	RPS4X	P62701	263 aa	Known RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	VEZF1	Q14119	521 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ATP6AP1L	Q52LC2	224 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	C6orf136	Q5SQH8	315 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	NCMAP	Q5T1S8	102 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	SFRP5	Q5T4F7	317 aa		9.35	□□□□□ -0.91

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