RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 LASP1Q14847 261 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 ETFDHQ16134 617 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 RFTN2Q52LD8 501 aaPredicted RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 LIPMQ5VYY2 423 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 HMBOX1Q6NT76 420 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 TFAP2EQ6VUC0 442 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 R3HCC1LQ7Z5L2 792 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 MTERF4Q7Z6M4 381 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 GABRG1Q8N1C3 465 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF614Q8N883 585 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF527Q8NB42 609 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 OR2T11Q8NH01 316 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 RFWD2Q8NHY2 731 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 ADAMTS15Q8TE58 950 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 CDS1Q92903 461 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 FAM120BQ96EK7 910 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF764Q96H86 408 aaPredicted RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 HOXD1Q9GZZ0 328 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 C12orf65Q9H3J6 166 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 PIGUQ9H490 435 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 YAE1D1Q9NRH1 226 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 KLHL13Q9P2N7 655 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 LIPT1Q9Y234 373 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 CARD8Q9Y2G2 431 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 MAGED1Q9Y5V3 778 aaPredicted RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 IGHV3-15A0A0B4J1V0 119 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 COPEO14579 308 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 FAM153BP0C7A2 387 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 DANCRP0C864 163 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 NEFHP12036 1026 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 ENPP1P22413 925 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 ELK4P28324 431 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 ADH6P28332 368 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 SLC7A1P30825 629 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 CRHR1P34998 444 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 BSPH1Q075Z2 132 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 KRTAP1-1Q07627 177 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 PDE7AQ13946 482 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 TOMM34Q15785 309 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 STK11Q15831 433 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 FAM153CQ494X1 144 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF672Q499Z4 452 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 CBLN3Q6UW01 205 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 BHLHA15Q7RTS1 189 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 ATG4DQ86TL0 474 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 DDIASQ8IXT1 998 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 SLC43A2Q8N370 569 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 KBTBD8Q8NFY9 601 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 OR2W6PQ8NHA6 318 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 ZFP90Q8TF47 636 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 MTERF3Q96E29 417 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 FCRL1Q96LA6 429 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 HS6ST2Q96MM7 605 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 STACQ99469 402 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 USB1Q9BQ65 265 aaKnown RBP9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 SLCO5A1Q9H2Y9 848 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 TUBB1Q9H4B7 451 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 DUSP22Q9NRW4 184 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 SIRT3Q9NTG7 399 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 CISD1Q9NZ45 108 aaKnown RBP9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 FAF1Q9UNN5 650 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 TMED5Q9Y3A6 229 aa9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 GPC6Q9Y625 555 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-202ENST00000596708 ZANQ9Y493 2812 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 MALRD1Q5VYJ5 2156 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 A0A1W2PNR3 127 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 DPRXA6NFQ7 191 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 SMIM23A6NLE4 172 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF814B7Z6K7 855 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 C9JVG2 144 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 KIF2AO00139 706 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 LSM1O15116 133 aaKnown RBP9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 OIP5O43482 229 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 ADAM11O75078 769 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 NDUFS7O75251 213 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 LYZL6O75951 148 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 IFNA2P01563 188 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 BCKDHAP12694 445 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 PRKCAP17252 672 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 HPCAL1P37235 193 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 RPL3P39023 403 aaKnown RBP9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 CCT3P49368 545 aaKnown RBP9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 CCR4P51679 360 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 ATP12AP54707 1039 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 SUMO3P55854 103 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 RAC3P60763 192 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 RASGEF1BQ0VAM2 473 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 SELENBP1Q13228 472 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 TP53BP2Q13625 1128 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 MLC1Q15049 377 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 P2RY6Q15077 328 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 SPDYE7PQ495Y7 208 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 CDC73Q6P1J9 531 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 PODNL1Q6PEZ8 512 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 C10orf107Q8IVU9 208 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 TMCO5AQ8N6Q1 288 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 OR7A2PQ8NGA2 310 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 PIWIL2Q8TC59 973 aaKnown RBP9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 GPR119Q8TDV5 335 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms