RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 IDO1P14902 403 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 ELK4P28324 431 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 KIR2DL2P43627 348 aaPredicted RBP13.71□□□□□ -0.21
TRIM28-203ENST00000593582 KHKP50053 298 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 CCR4P51679 360 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 FOXF1Q12946 379 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 ZNF141Q15928 474 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 SAXO2Q658L1 398 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 HBMQ6B0K9 141 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 HEPHL1Q6MZM0 1159 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 TNFAIP8L2Q6P589 184 aaPredicted RBP13.71□□□□□ -0.21
TRIM28-203ENST00000593582 VWA1Q6PCB0 445 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 BTLAQ7Z6A9 289 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 LILRA2Q8N149 483 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 GLB1L3Q8NCI6 653 aaPredicted RBP13.71□□□□□ -0.21
TRIM28-203ENST00000593582 TOR1AIP2Q8NFQ8 470 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 OR5W2Q8NH69 310 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 OR2V1Q8NHB1 315 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 POC1BQ8TC44 478 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 PIWIL2Q8TC59 973 aaKnown RBP13.71□□□□□ -0.21
TRIM28-203ENST00000593582 GPR119Q8TDV5 335 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 ZNF75CPQ92670 426 aaPredicted RBP13.71□□□□□ -0.21
TRIM28-203ENST00000593582 ADGRG7Q96K78 797 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 DACH2Q96NX9 599 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 PANX1Q96RD7 426 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 KLHDC3Q9BQ90 382 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 ZNF350Q9GZX5 532 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 NDRG3Q9UGV2 375 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 MKLN1Q9UL63 735 aa13.71□□□□□ -0.21
TRIM28-203ENST00000593582 NUP214P35658 2090 aaPredicted RBP13.7□□□□□ -0.22
TRIM28-203ENST00000593582 PCNX3Q9H6A9 2034 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 CCDC154A6NI56 674 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 GJE1A6NN92 205 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 C9JVG2 144 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 OIP5O43482 229 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 SLC22A3O75751 556 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 GUSBP08236 651 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 IL12AP29459 219 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 SFTPDP35247 375 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 HPCAP84074 193 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 CBFBQ13951 182 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 CTU2Q2VPK5 515 aaKnown RBP13.7□□□□□ -0.22
TRIM28-203ENST00000593582 NDUFAF6Q330K2 333 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 SLC9B1Q4ZJI4 515 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 EIF3MQ7L2H7 374 aaKnown RBP13.7□□□□□ -0.22
TRIM28-203ENST00000593582 FAM214BQ7L5A3 538 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 RFWD2Q8NHY2 731 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 FBXO27Q8NI29 283 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 OIT3Q8WWZ8 545 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 RAB8BQ92930 207 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 ARL8AQ96BM9 186 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 GMPPAQ96IJ6 420 aaPredicted RBP13.7□□□□□ -0.22
TRIM28-203ENST00000593582 MAELQ96JY0 434 aaKnown RBP13.7□□□□□ -0.22
TRIM28-203ENST00000593582 MRGPRX4Q96LA9 322 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 KLHL15Q96M94 604 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 SLC39A3Q9BRY0 314 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 TIGARQ9NQ88 270 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 POLE3Q9NRF9 147 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 EDARQ9UNE0 448 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 EMC9Q9Y3B6 208 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 WDR45Q9Y484 360 aa13.7□□□□□ -0.22
TRIM28-203ENST00000593582 MED12LQ86YW9 2145 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 A0A0J9YW62 118 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 SH3D21A4FU49 640 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 ZNF195O14628 629 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 CASKO14936 926 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 CXCL13O43927 109 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 KIAA0513O60268 411 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 UGT2B17O75795 530 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 CYP7B1O75881 506 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 GOSR1O95249 250 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 CSTAP01040 98 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 IL6P05231 212 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 CD8BP10966 210 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 PRKCAP17252 672 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 IL11P20809 199 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 DNAJA1P31689 397 aaKnown RBP13.69□□□□□ -0.22
TRIM28-203ENST00000593582 SLC6A8P48029 635 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 KCNJ5P48544 419 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 PCYT1AP49585 367 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 ANXA11P50995 505 aaKnown RBP13.69□□□□□ -0.22
TRIM28-203ENST00000593582 CARD18P57730 90 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 TXNL4AP83876 142 aaKnown RBP13.69□□□□□ -0.22
TRIM28-203ENST00000593582 GUSBP1Q15486 140 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 TOMM34Q15785 309 aaPredicted RBP13.69□□□□□ -0.22
TRIM28-203ENST00000593582 GSTA3Q16772 222 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 PDCD4Q53EL6 469 aaKnown RBP13.69□□□□□ -0.22
TRIM28-203ENST00000593582 GTF2IRD2BQ6EKJ0 949 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 ZNF621Q6ZSS3 439 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 GTF2IRD2Q86UP8 949 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 RNF130Q86XS8 419 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 NRGNQ92686 78 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 OSTF1Q92882 214 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 ROPN1LQ96C74 230 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 ARSGQ96EG1 525 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 REXO5Q96IC2 774 aaKnown RBP13.69□□□□□ -0.22
TRIM28-203ENST00000593582 LAT2Q9GZY6 243 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 OPN3Q9H1Y3 402 aaPredicted RBP13.69□□□□□ -0.22
TRIM28-203ENST00000593582 GLRX2Q9NS18 164 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms