RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TMEM233B4DJY2 109 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 NPIPB9F8W1W9 429 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 ZNF195O14628 629 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 PRKD3O94806 890 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 AK1P00568 194 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 DCST2Q5T1A1 773 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 ANKRD34AQ69YU3 496 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 ADAM5Q6NVV9 412 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 ZNF704Q6ZNC4 412 aaPredicted RBP16.83■□□□□ 0.28
CCDC43-205ENST00000592333 TCP10LQ8TDR4 215 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 TMEM171Q8WVE6 324 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 CHMP6Q96FZ7 201 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 ACTR6Q9GZN1 396 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 NGBQ9NPG2 151 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 ZNF701Q9NV72 531 aaPredicted RBP16.83■□□□□ 0.28
CCDC43-205ENST00000592333 ASIC5Q9NY37 505 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 KLHL13Q9P2N7 655 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 CLEC4AQ9UMR7 237 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 DTNAQ9Y4J8 743 aa16.83■□□□□ 0.28
CCDC43-205ENST00000592333 DSCAMO60469 2012 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 NTN1O95631 604 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 GUSBP08236 651 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 FOXF1Q12946 379 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 SELENBP1Q13228 472 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 PTGR1Q14914 329 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 P2RY6Q15077 328 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 SPDYE7PQ495Y7 208 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 IL23RQ5VWK5 629 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 GABRG1Q8N1C3 465 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 FNDC5Q8NAU1 212 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 LRRN4CLQ8ND94 238 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 GPR119Q8TDV5 335 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 TRIM44Q96DX7 344 aaPredicted RBP16.82■□□□□ 0.28
CCDC43-205ENST00000592333 Q96MF0 132 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 SMR3AQ99954 134 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 NMUR2Q9GZQ4 415 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 CXorf36Q9H7Y0 433 aa16.82■□□□□ 0.28
CCDC43-205ENST00000592333 GTPBP1O00178 669 aaKnown RBP16.81■□□□□ 0.28
CCDC43-205ENST00000592333 HS3ST1O14792 307 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 DNAJA2O60884 412 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 GCM2O75603 506 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-205ENST00000592333 SNUPNO95149 360 aaKnown RBP16.81■□□□□ 0.28
CCDC43-205ENST00000592333 SLU7O95391 586 aaKnown RBP16.81■□□□□ 0.28
CCDC43-205ENST00000592333 NUDT14O95848 222 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 YES1P07947 543 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 PRKCAP17252 672 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 PTH2RP49190 550 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 RAC3P60763 192 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 EMX2Q04743 252 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 IFFO1Q0D2I5 559 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 AP1ARQ63HQ0 302 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 CBLN3Q6UW01 205 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 FCRLAQ7L513 359 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 KIRREL3Q8IZU9 778 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 OR5W2Q8NH69 310 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 FBXO27Q8NI29 283 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 ZFP90Q8TF47 636 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 HSD17B8Q92506 261 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 PERPQ96FX8 193 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 DUSP26Q9BV47 211 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 MECRQ9BV79 373 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 TMEM185BQ9H7F4 350 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 SLC17A7Q9P2U7 560 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 CARD8Q9Y2G2 431 aa16.81■□□□□ 0.28
CCDC43-205ENST00000592333 ZNF264O43296 627 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 EFNA2O43921 213 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 CNOT4O95628 575 aaKnown RBP16.8■□□□□ 0.28
CCDC43-205ENST00000592333 C6orf47O95873 294 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 OPN1LWP04000 364 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 BPGMP07738 259 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 EFNA1P20827 205 aaPredicted RBP16.8■□□□□ 0.28
CCDC43-205ENST00000592333 SFTPDP35247 375 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 CLDN8P56748 225 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 CBFBQ13951 182 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 SFRP5Q5T4F7 317 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 TFAP2EQ6VUC0 442 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 OTUB1Q96FW1 271 aaPredicted RBP16.8■□□□□ 0.28
CCDC43-205ENST00000592333 PLPPR2Q96GM1 343 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 C3orf30Q96M34 536 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 SDF2Q99470 211 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 BCO1Q9HAY6 547 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 NOP53Q9NZM5 478 aaKnown RBP16.8■□□□□ 0.28
CCDC43-205ENST00000592333 KLHL9Q9P2J3 617 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 ZDHHC2Q9UIJ5 367 aa16.8■□□□□ 0.28
CCDC43-205ENST00000592333 H7C1Q1 480 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 LY6G6DO95868 133 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 AGR2O95994 175 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 ZNF141Q15928 474 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 ETFDHQ16134 617 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 TMEM176BQ3YBM2 270 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-205ENST00000592333 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC43-205ENST00000592333 DNAJC14Q6Y2X3 702 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-205ENST00000592333 TUSC5Q8IXB3 177 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 LRRC34Q8IZ02 419 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 OR2W6PQ8NHA6 318 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 ABHD3Q8WU67 409 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 ROBO4Q8WZ75 1007 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 ST8SIA1Q92185 356 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 TUBGCP3Q96CW5 907 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 OR7D2Q96RA2 312 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms