RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 EFNA1P20827 205 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-207ENST00000591519 RFX3P48380 749 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 KCNJ5P48544 419 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 RPL14P50914 215 aaKnown RBP9.31□□□□□ -0.92
VPS4B-207ENST00000591519 MANFP55145 182 aaKnown RBP9.31□□□□□ -0.92
VPS4B-207ENST00000591519 HSPB3Q12988 150 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 MLC1Q15049 377 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 ATP6AP1LQ52LC2 224 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 ZNF385BQ569K4 471 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 XKR7Q5GH72 579 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 CLEC9AQ6UXN8 241 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 STAC2Q6ZMT1 411 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 ESPNLQ6ZVH7 1005 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 ZNF550Q7Z398 422 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 MISPQ8IVT2 679 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 FNDC5Q8NAU1 212 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 OR10D3Q8NH80 312 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 CIDECQ96AQ7 238 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-207ENST00000591519 PPCDCQ96CD2 204 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 COX4I2Q96KJ9 171 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 PPP3R2Q96LZ3 170 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 BDH2Q9BUT1 245 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 NUF2Q9BZD4 464 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 EQTNQ9NQ60 294 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 EMC9Q9Y3B6 208 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 NSD1Q96L73 2696 aaPredicted RBP9.3□□□□□ -0.92
VPS4B-207ENST00000591519 ROS1P08922 2347 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 A0A1W2PRB8 838 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 EIF1AYO14602 144 aaKnown RBP9.3□□□□□ -0.92
VPS4B-207ENST00000591519 TMCC2O75069 709 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 BCKDHAP12694 445 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 ASMTP46597 345 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 EIF1AXP47813 144 aaKnown RBP9.3□□□□□ -0.92
VPS4B-207ENST00000591519 PRKAG1P54619 331 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 DUSP5Q16690 384 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 PLPPR5Q32ZL2 321 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 BEX5Q5H9J7 111 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 Q5PR19 223 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 C6orf136Q5SQH8 315 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 IL23RQ5VWK5 629 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 ATG16L1Q676U5 607 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 GTF2IRD2BQ6EKJ0 949 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 MFSD12Q6NUT3 480 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 BEND4Q6ZU67 534 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 R3HCC1LQ7Z5L2 792 aaKnown RBP9.3□□□□□ -0.92
VPS4B-207ENST00000591519 ZAR1Q86SH2 424 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 GTF2IRD2Q86UP8 949 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 POC1BQ8TC44 478 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 NUDT8Q8WV74 236 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 SLC9A6Q92581 669 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 MS4A4EQ96PG1 132 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 STACQ99469 402 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 CCL19Q99731 98 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 NPAS1Q99742 590 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 TMEM204Q9BSN7 226 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 PRRG4Q9BZD6 226 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 GSX2Q9BZM3 304 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 KLHL4Q9C0H6 718 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 MANSC1Q9H8J5 431 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 FANCFQ9NPI8 374 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 DUSP22Q9NRW4 184 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 MED17Q9NVC6 651 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 FBXO34Q9NWN3 711 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 SH3BP4Q9P0V3 963 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 ATP6V1HQ9UI12 483 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 MCTS1Q9ULC4 181 aaKnown RBP9.3□□□□□ -0.92
VPS4B-207ENST00000591519 VDAC3Q9Y277 283 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 GPR52Q9Y2T5 361 aa9.3□□□□□ -0.92
VPS4B-207ENST00000591519 A0A0J9YW62 118 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 GOLGA8QA0A0J9YX86 632 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 GOLGA8OA6NCC3 632 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 HMGB1P1B2RPK0 211 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 GOLGA8NF8WBI6 632 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 CXCL13O43927 109 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 LY6G6DO95868 133 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 ALOX5P09917 674 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 LINGO3P0C6S8 592 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 DDX5P17844 614 aaKnown RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 PSMB1P20618 241 aaKnown RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 ADH6P28332 368 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 MAPK1P28482 360 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 EIF1P41567 113 aaKnown RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 PRIM2P49643 509 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 CTBP2P56545 445 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 CARD18P57730 90 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 PTGR1Q14914 329 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 PDSS1Q5T2R2 415 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 ANKRD34AQ69YU3 496 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 FIGNL1Q6PIW4 674 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 PLEKHM3Q6ZWE6 761 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 Q71RC1 249 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 MTERF4Q7Z6M4 381 aaKnown RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 YTHDF3Q7Z739 585 aaKnown RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 CIARTQ8N365 385 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 KRTCAP2Q8N6L1 136 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 NATD1Q8N6N6 113 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 OR2V1Q8NHB1 315 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 B4GALNT2Q8NHY0 566 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 PSMA8Q8TAA3 256 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 DYDC1Q8WWB3 177 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms