RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	MEMO1	Q9Y316	297 aa		4.37	□□□□□ -1.71
TUBD1-208	ENST00000588009	LRP5L	A4QPB2	252 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	SNTN	A6NMZ2	147 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009		G3V4G9	280 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	FOXE1	O00358	373 aa	Predicted RBP	4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	TAPBP	O15533	448 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	ZNF264	O43296	627 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	ALOX5	P09917	674 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	ALPI	P09923	528 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	HSMCR30	P0CW71	290 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	UMPS	P11172	480 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	POU2F1	P14859	743 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	ACVR1B	P36896	505 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	MAGEA8	P43361	318 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	PUDP	Q08623	228 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	FCHO2	Q0JRZ9	810 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	BST1	Q10588	318 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	RAB40B	Q12829	278 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	IDI1	Q13907	227 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	DPYSL3	Q14195	570 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	NDUFA9	Q16795	377 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	TIGIT	Q495A1	244 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	TEX44	Q53QW1	395 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	ZC2HC1B	Q5TFG8	222 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	MEDAG	Q5VYS4	303 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	WSCD1	Q658N2	575 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	PVRIG	Q6DKI7	326 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	RUFY3	Q7L099	469 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	TRPM8	Q7Z2W7	1104 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	ABHD12	Q8N2K0	398 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	UBE2J2	Q8N2K1	259 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009		Q8N9G6	341 aa	Predicted RBP	4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	CSNK1G2-AS1	Q8NCQ2	148 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	OR5L2	Q8NGL0	311 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	OR4Q3	Q8NH05	313 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	SCFD1	Q8WVM8	642 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	IL1F10	Q8WWZ1	152 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	C18orf12	Q96KH6	178 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	RBM14	Q96PK6	669 aa	Known RBP	4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	OR5B2	Q96R09	309 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	PLIN2	Q99541	437 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	HCAR1	Q9BXC0	346 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	HEXA-AS1	Q9H8Q6	139 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	TXLNG	Q9NUQ3	528 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	ONECUT1	Q9UBC0	465 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	ADAM28	Q9UKQ2	775 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	RASD1	Q9Y272	281 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	PIGL	Q9Y2B2	252 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	POLDIP2	Q9Y2S7	368 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	CHD4	Q14839	1912 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	JCAD	Q9P266	1359 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	WDR7	Q9Y4E6	1490 aa		4.36	□□□□□ -1.71
TUBD1-208	ENST00000588009	RNF17	Q9BXT8	1623 aa	Known RBP	4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ARHGEF35	A5YM69	484 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	SAGE2P	A6NJ88	616 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	OR52A4P	A6NMU1	304 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ZNF716	A6NP11	495 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ZNF487	B1APH4	448 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009		H3BMQ9	156 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	NBR2	O15453	112 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	LRRTM2	O43300	516 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	TIMM8A	O60220	97 aa	Predicted RBP	4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ERLIN1	O75477	346 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	CIB2	O75838	187 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	HP	P00738	406 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	IGKV3-20	P01619	116 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	MELTF	P08582	738 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	UQCRFS1P1	P0C7P4	283 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ZNF735	P0CB33	412 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	SFTPC	P11686	197 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ACADS	P16219	412 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	DPEP1	P16444	411 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	MX1	P20591	662 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ARHGDIB	P52566	201 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	SEC61G	P60059	68 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ERVK11-1	P61568	191 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	RND3	P61587	244 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	PAX8	Q06710	450 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ST3GAL3	Q11203	375 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	TP53I3	Q53FA7	332 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	SFT2D3	Q587I9	215 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	LEMD1	Q68G75	181 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	ZNF329	Q86UD4	541 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	DHRSX	Q8N5I4	330 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	NECAB1	Q8N987	351 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	WDSUB1	Q8N9V3	476 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	OR2T33	Q8NG76	320 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	OR52K2	Q8NGK3	314 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	OR9A4	Q8NGU2	314 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	CNOT6L	Q96LI5	555 aa	Known RBP	4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	TM2D1	Q9BX74	207 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	GPR61	Q9BZJ8	451 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	MCCC2	Q9HCC0	563 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	WRAP73	Q9P2S5	460 aa	Predicted RBP	4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	SEC14L3	Q9UDX4	400 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	PRODH2	Q9UF12	536 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	TIMM10B	Q9Y5J6	103 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	PTPRG	P23470	1445 aa		4.35	□□□□□ -1.71
TUBD1-208	ENST00000588009	GOLGA8O	A6NCC3	632 aa		4.34	□□□□□ -1.71
TUBD1-208	ENST00000588009	GOLGA8N	F8WBI6	632 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms