RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 C21orf58P58505 322 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.32
RANBP3-208ENST00000587263 IRF9Q00978 393 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 DUSP2Q05923 314 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 SF3A3Q12874 501 aaKnown RBP eCLIP13.08□□□□□ -0.321e-6■■■■■ 48.1
RANBP3-208ENST00000587263 RAB35Q15286 201 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 TSC22D1Q15714 1073 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 SFRP5Q5T4F7 317 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 GTF2IRD2BQ6EKJ0 949 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 NPSR1Q6W5P4 371 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 ZCCHC23Q6ZST2 131 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 ATG4DQ86TL0 474 aaPredicted RBP13.08□□□□□ -0.32
RANBP3-208ENST00000587263 GTF2IRD2Q86UP8 949 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 SLC44A2Q8IWA5 706 aaPredicted RBP13.08□□□□□ -0.32
RANBP3-208ENST00000587263 GABRG1Q8N1C3 465 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 RFLNBQ8N5W9 214 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 ZNF525Q8N782 197 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 L3MBTL4Q8NA19 623 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 KISS1RQ969F8 398 aaPredicted RBP13.08□□□□□ -0.32
RANBP3-208ENST00000587263 NXNL1Q96CM4 212 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 L3HYPDHQ96EM0 354 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 MRPL1Q9BYD6 325 aaKnown RBP13.08□□□□□ -0.32
RANBP3-208ENST00000587263 ARL8BQ9NVJ2 186 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 RNF11Q9Y3C5 154 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 FREM1Q5H8C1 2179 aa13.08□□□□□ -0.32
RANBP3-208ENST00000587263 DPRXA6NFQ7 191 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 SYCE1LA8MT33 242 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 SHISA9B4DS77 424 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 KCNAB3O43448 404 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 TCF21O43680 179 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 CXCL13O43927 109 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 FADS1O60427 444 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 CSF3P09919 207 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 CFPP27918 469 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 CLK3P49761 638 aaKnown RBP13.07□□□□□ -0.32
RANBP3-208ENST00000587263 ZNF628Q5EBL2 1059 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 GALNT10Q86SR1 603 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 CNRIP1Q96F85 164 aaPredicted RBP13.07□□□□□ -0.32
RANBP3-208ENST00000587263 ZNF681Q96N22 645 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 FAIM2Q9BWQ8 316 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 ADAM19Q9H013 955 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 IPPKQ9H8X2 491 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 TAS2R1Q9NYW7 299 aa13.07□□□□□ -0.32
RANBP3-208ENST00000587263 YLPM1P49750 1951 aaKnown RBP13.07□□□□□ -0.32
RANBP3-208ENST00000587263 LOC100289279A0A1B0GTE1 492 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 SLC35F4A4IF30 521 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 RAMP1O60894 148 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 SMIM24O75264 130 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 CLDN9O95484 217 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 FGF4P08620 206 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 PABPC4LP0CB38 370 aaKnown RBP13.06□□□□□ -0.32
RANBP3-208ENST00000587263 GFAPP14136 432 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 ZNF17P17021 662 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 PTNP21246 168 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 ARL1P40616 181 aaPredicted RBP13.06□□□□□ -0.32
RANBP3-208ENST00000587263 ALDH9A1P49189 494 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 CCNG1P51959 295 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 GTF2H2Q13888 395 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 P2RY6Q15077 328 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 TMEM44Q2T9K0 475 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 ARL13AQ5H913 290 aaPredicted RBP13.06□□□□□ -0.32
RANBP3-208ENST00000587263 TMEM201Q5SNT2 666 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 SWT1Q5T5J6 900 aaKnown RBP13.06□□□□□ -0.32
RANBP3-208ENST00000587263 FRG2Q64ET8 278 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 C11orf71Q6IPW1 123 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 MFSD12Q6NUT3 480 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 GTF2H2CQ6P1K8 395 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 SEZ6L2Q6UXD5 910 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 TFAP2EQ6VUC0 442 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 COMMD6Q7Z4G1 85 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 METTL4Q8N3J2 472 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 OR2V1Q8NHB1 315 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 ACTRT2Q8TDY3 377 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 C10orf105Q8TEF2 133 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 DUSP19Q8WTR2 217 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 UTP4Q969X6 686 aaKnown RBP13.06□□□□□ -0.32
RANBP3-208ENST00000587263 ZMYND19Q96E35 227 aaPredicted RBP13.06□□□□□ -0.32
RANBP3-208ENST00000587263 RADILQ96JH8 1075 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 MAELQ96JY0 434 aaKnown RBP13.06□□□□□ -0.32
RANBP3-208ENST00000587263 ADGRG7Q96K78 797 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 FRG2BQ96QU4 278 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 ANKRA2Q9H9E1 313 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 CBLN4Q9NTU7 201 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 PNPOQ9NVS9 261 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 FAM120CQ9NX05 1096 aaKnown RBP13.06□□□□□ -0.32
RANBP3-208ENST00000587263 NDE1Q9NXR1 346 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 CADP27708 2225 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 MGAM2Q2M2H8 2515 aa13.06□□□□□ -0.32
RANBP3-208ENST00000587263 ALPK2Q86TB3 2170 aa13.05□□□□□ -0.32
RANBP3-208ENST00000587263 KIAA0513O60268 411 aa13.05□□□□□ -0.32
RANBP3-208ENST00000587263 LYPLA1O75608 230 aaPredicted RBP13.05□□□□□ -0.32
RANBP3-208ENST00000587263 MTHFD2P13995 350 aa13.05□□□□□ -0.32
RANBP3-208ENST00000587263 DLG1Q12959 904 aa13.05□□□□□ -0.32
RANBP3-208ENST00000587263 ITGADQ13349 1161 aa13.05□□□□□ -0.32
RANBP3-208ENST00000587263 PFKFB4Q16877 469 aa13.05□□□□□ -0.32
RANBP3-208ENST00000587263 PDSS1Q5T2R2 415 aa13.05□□□□□ -0.32
RANBP3-208ENST00000587263 FAM180BQ6P0A1 224 aa13.05□□□□□ -0.32
RANBP3-208ENST00000587263 SSX8Q7RTT4 187 aa13.05□□□□□ -0.32
RANBP3-208ENST00000587263 GOLGA7Q7Z5G4 137 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms