RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 KHKP50053 298 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 CAPZA1P52907 286 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SUMO3P55854 103 aaPredicted RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 ATP5IP56385 69 aaPredicted RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 NME5P56597 212 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 OR4D2P58180 307 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 TAS2R39P59534 338 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 EEF1A1P68104 462 aaKnown RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 CALCOCO2Q13137 446 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SCGB2A2Q13296 93 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 RUNX2Q13950 521 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 ICAM4Q14773 271 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 FASTKD3Q14CZ7 662 aaKnown RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 C18orf21Q32NC0 220 aaPredicted RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 FAM98BQ52LJ0 330 aaKnown RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 TTMPQ5BVD1 217 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SGO1Q5FBB7 561 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 EEF1A1P5Q5VTE0 462 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 ADNP2Q6IQ32 1131 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 NIPAL1Q6NVV3 410 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SPNS3Q6ZMD2 512 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 MDGA2Q7Z553 956 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 THOC6Q86W42 341 aaKnown RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 GALNT4Q8N4A0 578 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 POC5Q8NA72 575 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 TMEM178AQ8NBL3 297 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 B3GNT7Q8NFL0 401 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 AGAP11Q8TF27 550 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SLAMF9Q96A28 289 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 RHBDF1Q96CC6 855 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 MS4A6EQ96DS6 147 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 WDR34Q96EX3 536 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 CEP19Q96LK0 163 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SAMD8Q96LT4 415 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 TSNARE1Q96NA8 513 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 CACNG6Q9BXT2 260 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 TRIM54Q9BYV2 358 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 PITHD1Q9GZP4 211 aaPredicted RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 DDX47Q9H0S4 455 aaKnown RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 CDCP1Q9H5V8 836 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 RMND5AQ9H871 391 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 ZDHHC11Q9H8X9 412 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SH2D2AQ9NP31 389 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 TMEM140Q9NV12 185 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 PAQR5Q9NXK6 330 aaPredicted RBP5.65□□□□□ -1.5
LINC00556-201ENST00000569603 KCMF1Q9P0J7 381 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 PPP4R1LQ9P1A2 415 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 NPIPA1Q9UND3 350 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SLC22A14Q9Y267 594 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 MMACHCQ9Y4U1 282 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 U3KQV3 271 aa5.65□□□□□ -1.5
LINC00556-201ENST00000569603 SONP18583 2426 aaKnown RBP5.65□□□□□ -1.51
LINC00556-201ENST00000569603 MXRA5Q9NR99 2828 aa5.65□□□□□ -1.51
LINC00556-201ENST00000569603 DOCK7Q96N67 2140 aa5.65□□□□□ -1.51
LINC00556-201ENST00000569603 FAM230AA0A1W2PPH8 454 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 PINLYPA6NC86 204 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 NPEPPSL1A6NEC2 478 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 SLC33A1O00400 549 aaPredicted RBP5.64□□□□□ -1.51
LINC00556-201ENST00000569603 TAPBPO15533 448 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 TRIM3O75382 744 aaPredicted RBP5.64□□□□□ -1.51
LINC00556-201ENST00000569603 CRCPO75575 148 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 SCELO95171 688 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 CHEK2O96017 543 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 KRT6BP04259 564 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 SPARCP09486 303 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 UMPSP11172 480 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 RNH1P13489 461 aaKnown RBP5.64□□□□□ -1.51
LINC00556-201ENST00000569603 GRK3P35626 688 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 GDF5P43026 501 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 KRT6CP48668 564 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 CYB561P49447 251 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 NAGLUP54802 743 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 RAB8AP61006 207 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 RAB14P61106 215 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 S100A12P80511 92 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 IGLV3-21P80748 117 aaPredicted RBP5.64□□□□□ -1.51
LINC00556-201ENST00000569603 RBPJQ06330 500 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 RGS1Q08116 209 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 CSHL1Q14406 222 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 IRF3Q14653 427 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 FAM83EQ2M2I3 478 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 PCGF3Q3KNV8 242 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 CCDC153Q494R4 210 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 XKR6Q5GH73 641 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 SAPCD1Q5SSQ6 148 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 MBNL2Q5VZF2 373 aaKnown RBP5.64□□□□□ -1.51
LINC00556-201ENST00000569603 FAM45BPQ6NSW5 357 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 C16orf47Q6ZP98 133 aaPredicted RBP5.64□□□□□ -1.51
LINC00556-201ENST00000569603 ABHD13Q7L211 337 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 BIVMQ86UB2 503 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 NUDT13Q86X67 352 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 GHDCQ8N2G8 530 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 SLC35F6Q8N357 371 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 RPRMLQ8N4K4 120 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 TRPV3Q8NET8 790 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 SUN3Q8TAQ9 357 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 FAM57AQ8TBR7 257 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 FAM45AQ8TCE6 357 aa5.64□□□□□ -1.51
LINC00556-201ENST00000569603 PAQR8Q8TEZ7 354 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms