RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 HINT3Q9NQE9 182 aaKnown RBP8.14□□□□□ -1.11
LINC00558-201ENST00000569422 HPF1Q9NWY4 346 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 NDOR1Q9UHB4 597 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 CMAHPQ9Y471 501 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 A0A1B0GVC2 190 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 A6NIN4 97 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 B4DGG1 531 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 MASP2O00187 686 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 OR10H2O60403 315 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 TSC22D2O75157 780 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 PAICSP22234 425 aaKnown RBP8.14□□□□□ -1.11
LINC00558-201ENST00000569422 NDUFS1P28331 727 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 SLC1A3P43003 542 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 SLC9A3P48764 834 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 ZNF155Q12901 538 aaPredicted RBP8.14□□□□□ -1.11
LINC00558-201ENST00000569422 KCNJ8Q15842 424 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 DCST2Q5T1A1 773 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 PDZK1Q5T2W1 519 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 NXNL2Q5VZ03 156 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 WDR88Q6ZMY6 472 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 RASSF6Q6ZTQ3 369 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 ABI3BPQ7Z7G0 1075 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 MARCH9Q86YJ5 346 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 OR9A4Q8NGU2 314 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 CAPSLQ8WWF8 208 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 ZNF764Q96H86 408 aaPredicted RBP8.14□□□□□ -1.11
LINC00558-201ENST00000569422 NUDT16L1Q9BRJ7 211 aaKnown RBP8.14□□□□□ -1.11
LINC00558-201ENST00000569422 TEX12Q9BXU0 123 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 GLRX2Q9NS18 164 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 DDX28Q9NUL7 540 aaKnown RBP8.14□□□□□ -1.11
LINC00558-201ENST00000569422 CLEC1BQ9P126 229 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 CYP8B1Q9UNU6 501 aa8.14□□□□□ -1.11
LINC00558-201ENST00000569422 DOCK8Q8NF50 2099 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 A0A1W2PQ09 198 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 PRR19A6NJB7 356 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 H3BQ06 376 aaPredicted RBP8.13□□□□□ -1.11
LINC00558-201ENST00000569422 SURF4O15260 269 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CCNKO75909 580 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 TSPAN9O75954 239 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CLUP10909 449 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 NOS3P29474 1203 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 OR2B6P58173 313 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 RAB40BQ12829 278 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 OR1Q1Q15612 314 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CLEC2AQ6UVW9 174 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 DGAT2L6Q6ZPD8 337 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 ABHD13Q7L211 337 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 LINC00471Q8N535 108 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CAMKVQ8NCB2 501 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 OR2T33Q8NG76 320 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 OR10H4Q8NGA5 316 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 OR4N2Q8NGD1 307 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 OR51L1Q8NGJ5 315 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 OSTF1Q92882 214 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 GAS2L1Q99501 681 aaPredicted RBP8.13□□□□□ -1.11
LINC00558-201ENST00000569422 GABRG3Q99928 467 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 IFT27Q9BW83 186 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 HCAR1Q9BXC0 346 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 BEX2Q9BXY8 128 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 NDEL1Q9GZM8 345 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 OR52D1Q9H346 318 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 HCN3Q9P1Z3 774 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CPNE7Q9UBL6 633 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 TNFRSF10DQ9UBN6 386 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 PHF11Q9UIL8 331 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 MSRAQ9UJ68 235 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 KCNE5Q9UJ90 142 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 TBC1D24Q9ULP9 559 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 SLCO1B1Q9Y6L6 691 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CLCA3PQ9Y6N3 262 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 A3GALT2U3KPV4 340 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 URADA6NGE7 173 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CCDC85CA6NKD9 419 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 SYT5O00445 386 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 GMFGO60234 142 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CTSEP14091 401 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CPEP16870 476 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 BMP7P18075 431 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 MAKP20794 623 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 HTR2AP28223 471 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 TEAD1P28347 426 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 RCVRNP35243 200 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 PSPHP78330 225 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 MAT1AQ00266 395 aaKnown RBP8.13□□□□□ -1.11
LINC00558-201ENST00000569422 KIR2DS3Q14952 304 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 ZNF79Q15937 498 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 PGGHGQ32M88 737 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 MINDY4Q4G0A6 757 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CD300LDQ6UXZ3 194 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 MBOAT2Q6ZWT7 520 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CXXC5Q7LFL8 322 aaKnown RBP8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CADM2Q8N3J6 435 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 FAM160A2Q8N612 972 aaPredicted RBP8.13□□□□□ -1.11
LINC00558-201ENST00000569422 SIRT6Q8N6T7 355 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 CSNK1A1LQ8N752 337 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 OR13C2Q8NGS9 318 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 SLC37A2Q8TED4 501 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 RSC1A1Q92681 617 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 DNAJA3Q96EY1 480 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 RIPOR3Q96MK2 946 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms