RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 LOXL1Q08397 574 aaPredicted RBP13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 FOXF1Q12946 379 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 KIAA0040Q15053 153 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 TSC22D1Q15714 1073 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 DUSP5Q16690 384 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 CLEC2AQ6UVW9 174 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 SZRD1Q7Z422 152 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 ZNF619Q8N2I2 560 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 CCNYL1Q8N7R7 359 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 OR10H5Q8NGA6 315 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 PPCDCQ96CD2 204 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 EGLN2Q96KS0 407 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 MRGPRX4Q96LA9 322 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 TNFRSF13CQ96RJ3 184 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 SRXN1Q9BYN0 137 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 AMBRA1Q9C0C7 1298 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 REEP4Q9H6H4 257 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 DCDC2Q9UHG0 476 aa13.96□□□□□ -0.17
HERPUD1-215ENST00000568676 ELOA3DA6NLF2 546 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 SHISA9B4DS77 424 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 ZNF814B7Z6K7 855 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 SLC28A1O00337 649 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 SSX4O60224 188 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 NUDT14O95848 222 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 UROSP10746 265 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 SLC25A16P16260 332 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 ATP6V1C1P21283 382 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 SLC7A1P30825 629 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 VLDLRP98155 873 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 ZNF117Q03924 483 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 SELENBP1Q13228 472 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 MLC1Q15049 377 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 CD226Q15762 336 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 TMEM249Q2WGJ8 235 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 ELOA3BQ3SY89 546 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 TMEM176BQ3YBM2 270 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 ARL13AQ5H913 290 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 EXOSC6Q5RKV6 272 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 TMEM108Q6UXF1 575 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 SYT10Q6XYQ8 523 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 FRMD7Q6ZUT3 714 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 ELOA3Q8NG57 546 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 FBXO27Q8NI29 283 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 PHOSPHO1Q8TCT1 267 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 MTERF3Q96E29 417 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 PSD2Q9BQI7 771 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 C1orf109Q9NX04 203 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 GDF2Q9UK05 429 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 ICAM5Q9UMF0 924 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 B3GALT5Q9Y2C3 310 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 CCL27Q9Y4X3 112 aa13.95□□□□□ -0.18
HERPUD1-215ENST00000568676 ZNF724A8MTY0 619 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 NDUFS7O75251 213 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 PGM3O95394 542 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 C8BP07358 591 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 MYL2P10916 166 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 NEFHP12036 1026 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 GGT1P19440 569 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 COX5AP20674 150 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 SHC1P29353 583 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 PDE7AQ13946 482 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 STK11Q15831 433 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 SLC25A53Q5H9E4 307 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 CFAP157Q5JU67 520 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 RNF165Q6ZSG1 346 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 R3HCC1LQ7Z5L2 792 aaKnown RBP13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 ZAR1Q86SH2 424 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 IFT81Q8WYA0 676 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 CIDECQ96AQ7 238 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 FCRL1Q96LA6 429 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 BEX2Q9BXY8 128 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 PIGUQ9H490 435 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 COQ10BQ9H8M1 238 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 CBLN4Q9NTU7 201 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 SH3BP4Q9P0V3 963 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 TMED5Q9Y3A6 229 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 CUBNO60494 3623 aa13.94□□□□□ -0.18
HERPUD1-215ENST00000568676 IGHV4-30-2A0A087WSY4 118 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 A0A096LNT2 108 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 FAM234BA2RU67 622 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 ETV2O00321 342 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 ABCD4O14678 606 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 EFNA2O43921 213 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 CYTIPO60759 359 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 RAMP1O60894 148 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 LYZL6O75951 148 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 KRT16P08779 473 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 CSF3P09919 207 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 BMP4P12644 408 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 PRKCAP17252 672 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 PTAFRP25105 342 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 TTKP33981 857 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 ASMTP46597 345 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 C21orf58P58505 322 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 DNAJB13P59910 316 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 RASGEF1BQ0VAM2 473 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 RAB35Q15286 201 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 KLHL26Q53HC5 615 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 C3orf33Q6P1S2 294 aa13.93□□□□□ -0.18
HERPUD1-215ENST00000568676 KLHL17Q6TDP4 642 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms