RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 RAET1LQ5VY80 246 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 OR2A2Q6IF42 318 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 BLOC1S3Q6QNY0 202 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 MEX3BQ6ZN04 569 aaKnown RBP7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 LRRC74BQ6ZQY2 392 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 ESPNLQ6ZVH7 1005 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 RNF130Q86XS8 419 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 ZNF619Q8N2I2 560 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 MIER2Q8N344 545 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 MEIOBQ8N635 442 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 PHOSPHO1Q8TCT1 267 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 XAGE5Q8WWM1 108 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 MRGPRX4Q96LA9 322 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 PANX1Q96RD7 426 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 ZBTB18Q99592 522 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 EBF4Q9BQW3 602 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 PAIP1Q9H074 479 aaKnown RBP7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 SLC38A1Q9H2H9 487 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 ZNF385DQ9H6B1 395 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 MTHFD2LQ9H903 347 aaPredicted RBP7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 MCCC2Q9HCC0 563 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 TCF7L2Q9NQB0 619 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 EXOSC3Q9NQT5 275 aaKnown RBP7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 ZNF446Q9NWS9 450 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 SPG11Q96JI7 2443 aa7.36□□□□□ -1.23
HDGFL3-205ENST00000568129 DSPPQ9NZW4 1301 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 TRBV5-3A0A0A0MS03 114 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 NPIPA5A0A0B4J1W7 369 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 A0A0J9YW62 118 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 CENPVL1A0A0U1RR11 272 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 A0A1W2PNV4 684 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 AGAP5A6NIR3 686 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 C9JVG2 144 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 NPIPA7E9PJI5 369 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 H0YC42 278 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 FAAHO00519 579 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 RFXANKO14593 260 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 MSTNO14793 375 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 EDF1O60869 148 aaKnown RBP7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 DIAPH2O60879 1101 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 GOSR1O95249 250 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 TFPTP0C1Z6 253 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 NPIPA8P0DM63 369 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 BMP5P22003 454 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 SOAT1P35610 550 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 KHKP50053 298 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 ZNF41P51814 821 aaPredicted RBP7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 TPD52P55327 224 aaPredicted RBP7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 NME5P56597 212 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 RPS3AP61247 264 aaKnown RBP7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 KCNJ10P78508 379 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 GPR68Q15743 365 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 TOMM34Q15785 309 aaPredicted RBP7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 COX20Q5RI15 118 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 PDZK1Q5T2W1 519 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 ATAD3BQ5T9A4 648 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 PRAMEF8Q5VWM4 474 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 PRAMEF7Q5VXH5 474 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 METTL21CQ5VZV1 264 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 NXNQ6DKJ4 435 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 TNFAIP8L2Q6P589 184 aaPredicted RBP7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 ZNF621Q6ZSS3 439 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 GRAMD2AQ8IUY3 354 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 CMIPQ8IY22 773 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 GATSQ8NAP1 163 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 OR5M1Q8NGP8 315 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 OR9I1Q8NGQ6 314 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 TSPEARQ8WU66 669 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 ST8SIA1Q92185 356 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 RAB8BQ92930 207 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 STARD4Q96DR4 205 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 ITCHQ96J02 903 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 SIKE1Q9BRV8 207 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 RMND5AQ9H871 391 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 GP6Q9HCN6 339 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 PLSCR4Q9NRQ2 329 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 GLRX2Q9NS18 164 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 ACER3Q9NUN7 267 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 THUMPD1Q9NXG2 353 aaKnown RBP7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 MKLN1Q9UL63 735 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 VDAC3Q9Y277 283 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 SLC35A3Q9Y2D2 325 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 CARD8Q9Y2G2 431 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 WDR45Q9Y484 360 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 CSMD1Q96PZ7 3565 aa7.35□□□□□ -1.23
HDGFL3-205ENST00000568129 SLC22A20A6NK97 555 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 SHISA8B8ZZ34 492 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 H3BML4 177 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 GTPBP1O00178 669 aaKnown RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 POLR3GO15318 223 aaPredicted RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 BCAS1O75363 584 aaPredicted RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 AQP8O94778 261 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 H6PDO95479 791 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 CHRM4P08173 479 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 CD8BP10966 210 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 UBL4AP11441 157 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 FKBP2P26885 142 aaKnown RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 CHI3L1P36222 383 aaPredicted RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 ANXA11P50995 505 aaKnown RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 AQP5P55064 265 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms