RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CTXN1P60606 82 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 COX20Q5RI15 118 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 XAF1Q6GPH4 301 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 TRIM46Q7Z4K8 759 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 GPR148Q8TDV2 347 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 JSRP1Q96MG2 331 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR5B12Q96R08 314 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 VRK1Q99986 396 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 C1QTNF2Q9BXJ5 285 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR8D2Q9GZM6 311 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 MEPEQ9NQ76 525 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 TDP1Q9NUW8 608 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 TRABD2BA6NFA1 517 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 HLA-AP01891 365 aaKnown RBP11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 SYPP08247 313 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 AVPI1Q5T686 147 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 SBSNQ6UWP8 590 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 ADGRF3Q8IZF5 1079 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF283Q8N7M2 679 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR5M3Q8NGP4 307 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 FOXRED1Q96CU9 486 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 DCLRE1CQ96SD1 692 aaKnown RBP11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC38A3Q99624 504 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 SSX3Q99909 188 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLIRPQ9GZT3 109 aaKnown RBP11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 NIT2Q9NQR4 276 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 MUTYHQ9UIF7 546 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 INSL5Q9Y5Q6 135 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 A0A0D9SG52 128 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 TRDV1A0A1B0GX56 115 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 HCRTR2O43614 444 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 NUDT1P36639 197 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 VASNQ6EMK4 673 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 PAQR6Q6TCH4 344 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 ASPGQ86U10 573 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 PGBD5Q8N414 524 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 IL17RDQ8NFM7 739 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF417Q8TAU3 575 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 LGALS14Q8TCE9 139 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 SAMD11Q96NU1 681 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 MRI1Q9BV20 369 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 PRRG4Q9BZD6 226 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC38A1Q9H2H9 487 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 IKZF5Q9H5V7 419 aa11.65□□□□□ -0.55
CSPG4P13-202ENST00000567704 FBXO24O75426 580 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 CSF3P09919 207 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 TMEM35AQ53FP2 167 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 GPR157Q5UAW9 335 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 SPRYD7Q5W111 196 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 GLCCI1Q86VQ1 547 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 CBARPQ8N350 705 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 ST7LQ8TDW4 575 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC38A5Q8WUX1 472 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 BRI3BPQ8WY22 251 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF566Q969W8 418 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 METTL2AQ96IZ6 378 aaKnown RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 SMIM3Q9BZL3 60 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 ATXN7L1Q9ULK2 861 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 CHD4Q14839 1912 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 ACOD1A6NK06 481 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 TSTD3H0UI37 97 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 GAPDHSO14556 408 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF623O75123 536 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF16P17020 682 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 IDH3GP51553 393 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 CHST14Q8NCH0 376 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 OR5H2Q8NGV7 314 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 LKAAEAR1Q8TD35 194 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 ASB11Q8WXH4 323 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 GHSRQ92847 366 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 CDC6Q99741 560 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF559Q9BR84 538 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC34A2O95436 690 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 PLGP00747 810 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 GAAP10253 952 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 ADH5P11766 374 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 CD70P32970 193 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 MTNR1BP49286 362 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 PPT1P50897 306 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 TSPAN31Q12999 210 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 EXOSC2Q13868 293 aaKnown RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 RBMS2Q15434 407 aaKnown RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC51BQ86UW2 128 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 VRK2Q86Y07 508 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 GLB1L2Q8IW92 636 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 NANOGP1Q8N7R0 232 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 OR9A2Q8NGT5 310 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 OVCA2Q8WZ82 227 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 BPIFA2Q96DR5 249 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 TMEM121BQ9BXQ6 578 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 C1GALT1Q9NS00 363 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC25A37Q9NYZ2 338 aa11.64□□□□□ -0.55
CSPG4P13-202ENST00000567704 TRAV27A0A087WT01 109 aa11.63□□□□□ -0.55
CSPG4P13-202ENST00000567704 NPIPA5A0A0B4J1W7 369 aa11.63□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF705GA8MUZ8 300 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P13-202ENST00000567704 NPIPA7E9PJI5 369 aa11.63□□□□□ -0.55
CSPG4P13-202ENST00000567704 NPIPA8P0DM63 369 aa11.63□□□□□ -0.55
CSPG4P13-202ENST00000567704 BATFQ16520 125 aa11.63□□□□□ -0.55
CSPG4P13-202ENST00000567704 C2orf27AQ580R0 203 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms