RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 UNC50Q53HI1 259 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 LGSNQ5TDP6 509 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 AP1ARQ63HQ0 302 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 OLFML1Q6UWY5 402 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NIPA1Q7RTP0 329 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 APTXQ7Z2E3 356 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 RD3Q7Z3Z2 195 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 HSD11B1LQ7Z5J1 315 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 PIGZQ86VD9 579 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 DCUN1D3Q8IWE4 304 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 DHRSXQ8N5I4 330 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NANOGP1Q8N7R0 232 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 LINC00469Q8N7U9 141 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 KBTBD3Q8NAB2 608 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 ZSCAN4Q8NAM6 433 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 OR4D6Q8NGJ1 314 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 OR1L3Q8NH93 324 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 MPLKIPQ8TAP9 179 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 MARCH1Q8TCQ1 289 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 CA5BP1Q8WTZ4 195 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 APOBEC4Q8WW27 367 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 PLEKHA8Q96JA3 519 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF578Q96N58 590 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 TGS1Q96RS0 853 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 CLCC1Q96S66 551 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 CPXM1Q96SM3 734 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 HINT2Q9BX68 163 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NDEL1Q9GZM8 345 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 PRSS22Q9GZN4 317 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 PEG3Q9GZU2 1588 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NMRAL1Q9HBL8 299 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 ADGRL4Q9HBW9 690 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 MRPS30Q9NP92 439 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NANSQ9NR45 359 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 MAN2C1Q9NTJ4 1040 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 ZDHHC18Q9NUE0 388 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 LYARQ9NX58 379 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 ELOVL5Q9NYP7 299 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 SIGLEC8Q9NYZ4 499 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 STX18Q9P2W9 335 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 TUBGCP4Q9UGJ1 667 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 NPIPA1Q9UND3 350 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 FLVCR2Q9UPI3 526 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 PDE10AQ9Y233 779 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 EXOGQ9Y2C4 368 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 EXOSC1Q9Y3B2 195 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 INSL6Q9Y581 213 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 KPTNQ9Y664 436 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 FGD5Q6ZNL6 1462 aa2.89□□□□□ -1.95
HERPUD1-211ENST00000566550 MEX3AA1L020 520 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 RAB19A4D1S5 217 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 FRG2CA6NGY1 282 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 OR6C65A6NJZ3 312 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 PPP1R2P9O14990 202 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 SCAMP2O15127 329 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 SIVA1O15304 175 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 TAPBPO15533 448 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 OAZ2O95190 189 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 CAVIN2O95810 425 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 LATS1O95835 1130 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 OAS1P00973 400 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 IGHV4-39P01824 125 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 S100A6P06703 90 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 SP1P08047 785 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 H2BFMP0C1H6 154 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 CCNOP22674 350 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 CALML3P27482 149 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 DCKP27707 260 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 RRM2P31350 389 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 CEACAM8P31997 349 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 MMP12P39900 470 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 RFX3P48380 749 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 IST1P53990 364 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 XGP55808 180 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 KCNJ2P63252 427 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 IL9RQ01113 521 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 VGLL4Q14135 290 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 GCKRQ14397 625 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 RAB35Q15286 201 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ETFDHQ16134 617 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC5A12Q1EHB4 618 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 SGSM1Q2NKQ1 1148 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 KLHL38Q2WGJ6 581 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC25A52Q3SY17 297 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 VPS26BQ4G0F5 336 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 MTX3Q5HYI7 312 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 BEND3Q5T5X7 828 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 WSCD1Q658N2 575 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 C8orf82Q6P1X6 216 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 PAQR6Q6TCH4 344 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 LRRC31Q6UY01 552 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ADAMTSL5Q6ZMM2 481 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF852Q6ZMS4 543 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 LEKR1Q6ZMV7 388 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 GCNT7Q6ZNI0 430 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 NDUFAF7Q7L592 441 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 MMAAQ8IVH4 418 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 PQLC3Q8N755 202 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 GVQW1Q8N7I0 195 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms