RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 PSMB1P20618 241 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 AGTR1P30556 359 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 HBA1P69905 142 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 FOXF1Q12946 379 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 RNPS1Q15287 305 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 ZNF239Q16600 458 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 SPDYE7PQ495Y7 208 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 BEX5Q5H9J7 111 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 TOR1AIP2Q8NFQ8 470 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 GPR119Q8TDV5 335 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 CHMP6Q96FZ7 201 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 MRGPRX4Q96LA9 322 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 OR7D2Q96RA2 312 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 SDF2Q99470 211 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 NMUR2Q9GZQ4 415 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 TMEM185BQ9H7F4 350 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 ZNF395Q9H8N7 513 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 SSU72Q9NP77 194 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 TIGARQ9NQ88 270 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 CARD8Q9Y2G2 431 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 DTNAQ9Y4J8 743 aa15.37■□□□□ 0.05
VPS9D1-203ENST00000563798 DUXAA6NLW8 204 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 BIRC5O15392 142 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 EIF4E2O60573 245 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 SMPD2O60906 423 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 SKAP2O75563 359 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 SNUPNO95149 360 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 AK1P00568 194 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 GUSBP08236 651 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 INHBBP09529 407 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 PRKCAP17252 672 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 SHC1P29353 583 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 EXOC3L2Q2M3D2 409 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 ANKRD34AQ69YU3 496 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 STK32CQ86UX6 486 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 NUDCD3Q8IVD9 361 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 OR8J2Q8NGG1 315 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 FBXO27Q8NI29 283 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 PPP1R14CQ8TAE6 165 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 MIPOL1Q8TD10 442 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 OIT3Q8WWZ8 545 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 ZC3HAV1LQ96H79 300 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 TMEM204Q9BSN7 226 aa15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 NOP53Q9NZM5 478 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-203ENST00000563798 NPIPA5A0A0B4J1W7 369 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 ESPNB1AK53 854 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 NPIPA7E9PJI5 369 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 RNASET2O00584 256 aaKnown RBP15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 TMCC2O75069 709 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 SERPINE1P05121 402 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 NPIPA8P0DM63 369 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 PAX1P15863 534 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 NR1H2P55055 460 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 TOMM34Q15785 309 aaPredicted RBP15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 ZNF141Q15928 474 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 Q5PR19 223 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 PPP4R4Q6NUP7 873 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 LRRC34Q8IZ02 419 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 OR5W2Q8NH69 310 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 ZNF524Q96C55 264 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 HDHD5Q9BXW7 423 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 SRXN1Q9BYN0 137 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 SERHL2Q9H4I8 314 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 COQ10BQ9H8M1 238 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 UBTD1Q9HAC8 227 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 KLHL13Q9P2N7 655 aa15.35■□□□□ 0.05
VPS9D1-203ENST00000563798 UQCRHLA0A096LP55 91 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 SERINC4A6NH21 518 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 GTPBP1O00178 669 aaKnown RBP15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 CFLARO15519 480 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 ZNF264O43296 627 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 ITM2AO43736 263 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 SCN2BO60939 215 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 GCM2O75603 506 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 DHRS4L1P0CG22 281 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 SFTPDP35247 375 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 HEPHL1Q6MZM0 1159 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 C6orf120Q7Z4R8 191 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 P3H2Q8IVL5 708 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 GABRG1Q8N1C3 465 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 SLC43A2Q8N370 569 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 OR5D16Q8NGK9 328 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 OR5AK3PQ8NH89 298 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 ZFP90Q8TF47 636 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 ABHD3Q8WU67 409 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 ROBO4Q8WZ75 1007 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 REXO5Q96IC2 774 aaKnown RBP15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 CCL19Q99731 98 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 TACO1Q9BSH4 297 aaKnown RBP15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 GSX2Q9BZM3 304 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 ACTR6Q9GZN1 396 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 KCNE5Q9UJ90 142 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 HAO1Q9UJM8 370 aa15.34■□□□□ 0.05
VPS9D1-203ENST00000563798 NUP214P35658 2090 aaPredicted RBP15.33■□□□□ 0.04
VPS9D1-203ENST00000563798 FAM171A2A8MVW0 826 aa15.33■□□□□ 0.04
VPS9D1-203ENST00000563798 PRKD3O94806 890 aa15.33■□□□□ 0.04
VPS9D1-203ENST00000563798 NUDT14O95848 222 aa15.33■□□□□ 0.04
VPS9D1-203ENST00000563798 MYZAPP0CAP1 466 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms