RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ZNF619Q8N2I2 560 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 POU5F2Q8N7G0 328 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 OR1J4Q8NGS1 313 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 OR4C3Q8NH37 302 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 RCN3Q96D15 328 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 ZNF559Q9BR84 538 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 NANOGQ9H9S0 305 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 A4GALTQ9NPC4 353 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 FBXO34Q9NWN3 711 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 C15orf41Q9Y2V0 281 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 C17orf51A8MQB3 221 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 NPIPB9F8W1W9 429 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 FXYD1O00168 92 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 SNPHO15079 494 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 KIAA0513O60268 411 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 CBR3O75828 277 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 H6PDO95479 791 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 C1QCP02747 245 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 HPNP05981 417 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 BMP7P18075 431 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 RBBP4Q09028 425 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 FUT5Q11128 374 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 TOMM20Q15388 145 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 ZNF141Q15928 474 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 SYPL1Q16563 259 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 ACSF3Q4G176 576 aaPredicted RBP14.19□□□□□ -0.14
USB1-208ENST00000563207 KLHL26Q53HC5 615 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 GCNT6Q5T4J0 391 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 RIPPLY2Q5TAB7 128 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 TYW3Q6IPR3 259 aaKnown RBP14.19□□□□□ -0.14
USB1-208ENST00000563207 FRRS1Q6ZNA5 592 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 ZAR1Q86SH2 424 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 GALNT10Q86SR1 603 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 SERPINA11Q86U17 422 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 YRDCQ86U90 279 aaKnown RBP14.19□□□□□ -0.14
USB1-208ENST00000563207 PLCZ1Q86YW0 608 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 SLC38A5Q8WUX1 472 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 KAT8Q9H7Z6 458 aaKnown RBP14.19□□□□□ -0.14
USB1-208ENST00000563207 MKLN1Q9UL63 735 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 DTNAQ9Y4J8 743 aa14.19□□□□□ -0.14
USB1-208ENST00000563207 IGLV3-32A0A0A0MS00 114 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 A0A0G2JPF8 293 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 PRAMEF27A3QJZ7 478 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 HNRNPCL2B2RXH8 293 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 B4DXG7 233 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 HNRNPCL3B7ZW38 293 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 AIM2O14862 343 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 NDUFB5O43674 189 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 FCMRO60667 390 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 HNRNPCL1O60812 293 aaKnown RBP14.18□□□□□ -0.14
USB1-208ENST00000563207 ANGPTL1O95841 491 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 HNRNPCL4P0DMR1 293 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 ARAFP10398 606 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 GABRA1P14867 456 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 BMP5P22003 454 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 GPR68Q15743 365 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 ZSWIM7Q19AV6 140 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 VASNQ6EMK4 673 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 ARSKQ6UWY0 536 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 SLC30A8Q8IWU4 369 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 FITM2Q8N6M3 262 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 ECSITQ9BQ95 431 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 UGT2B28Q9BY64 529 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 SLC38A1Q9H2H9 487 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 IKZF5Q9H5V7 419 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 BCL2L10Q9HD36 194 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 PPP4R1LQ9P1A2 415 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 KCNN3Q9UGI6 736 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 TAGLN3Q9UI15 199 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 CAMK2AQ9UQM7 478 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 MRPS18CQ9Y3D5 142 aaKnown RBP14.18□□□□□ -0.14
USB1-208ENST00000563207 MED13LQ71F56 2210 aa14.18□□□□□ -0.14
USB1-208ENST00000563207 C5orf58C9J3I9 102 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 SCO2O43819 266 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 UGT2B17O75795 530 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 EPPINO95925 133 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 BCHEP06276 602 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 CHRM4P08173 479 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 SLC6A2P23975 617 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 UQCRC1P31930 480 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 CEACAM8P31997 349 aaPredicted RBP14.17□□□□□ -0.14
USB1-208ENST00000563207 NUDT2P50583 147 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 ZNF136P52737 540 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 MTPNP58546 118 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 CHRNEQ04844 493 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 CAPRIN1Q14444 709 aaKnown RBP14.17□□□□□ -0.14
USB1-208ENST00000563207 REEP3Q6NUK4 255 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 APOOLQ6UXV4 268 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 NET1Q7Z628 596 aaPredicted RBP14.17□□□□□ -0.14
USB1-208ENST00000563207 MARCH3Q86UD3 253 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 ANKFN1Q8N957 763 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 WDSUB1Q8N9V3 476 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 C11orf65Q8NCR3 313 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 FAM83FQ8NEG4 500 aaPredicted RBP14.17□□□□□ -0.14
USB1-208ENST00000563207 BBS10Q8TAM1 723 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 DUSP19Q8WTR2 217 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 WDYHV1Q96HA8 205 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 TMEM19Q96HH6 336 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 GPATCH1Q9BRR8 931 aaKnown RBP14.17□□□□□ -0.14
USB1-208ENST00000563207 PTGES2Q9H7Z7 377 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms