RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ADAM5Q6NVV9 412 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 CDC73Q6P1J9 531 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 Q6ZSR9 355 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 BHLHA15Q7RTS1 189 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 MTERF4Q7Z6M4 381 aaKnown RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 GSPT2Q8IYD1 628 aaKnown RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 GABRG1Q8N1C3 465 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 ADAMTS15Q8TE58 950 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 NEUROG1Q92886 237 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 MTERF3Q96E29 417 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 FCRL1Q96LA6 429 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 HS6ST2Q96MM7 605 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 STACQ99469 402 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 RHOXF2Q9BQY4 288 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 POTEKPQ9BYX7 375 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 REG4Q9BYZ8 158 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 HOXD1Q9GZZ0 328 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 PIGUQ9H490 435 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 ALG2Q9H553 416 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 DUSP22Q9NRW4 184 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 MID2Q9UJV3 735 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 FAF1Q9UNN5 650 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 LIPT1Q9Y234 373 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 MAGED1Q9Y5V3 778 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 GPC6Q9Y625 555 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-202ENST00000562722 TLN2Q9Y4G6 2542 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 HEATR5AQ86XA9 2040 aa11.55□□□□□ -0.56
SF3B3-202ENST00000562722 CSPG4Q6UVK1 2322 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 USF3Q68DE3 2245 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 IGHV3-15A0A0B4J1V0 119 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 TMEM114B3SHH9 223 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 NPIPB8E9PQR5 432 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 KIF2AO00139 706 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-202ENST00000562722 LSM1O15116 133 aaKnown RBP11.54□□□□□ -0.56
SF3B3-202ENST00000562722 OIP5O43482 229 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 YES1P07947 543 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 BCKDHAP12694 445 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 MAPK1P28482 360 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 RPL3P39023 403 aaKnown RBP11.54□□□□□ -0.56
SF3B3-202ENST00000562722 P2RX1P51575 399 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 BSPH1Q075Z2 132 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 ITGADQ13349 1161 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 P2RY6Q15077 328 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 ZNF672Q499Z4 452 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-202ENST00000562722 DCST2Q5T1A1 773 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 HEPHL1Q6MZM0 1159 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 CBLN3Q6UW01 205 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 ATG4DQ86TL0 474 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-202ENST00000562722 C10orf107Q8IVU9 208 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 C4orf33Q8N1A6 199 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 KBTBD8Q8NFY9 601 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 LILRB1Q8NHL6 650 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-202ENST00000562722 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 ZFP90Q8TF47 636 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 UBLCP1Q8WVY7 318 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-202ENST00000562722 TUBB1Q9H4B7 451 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 GP6Q9HCN6 339 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 SIRT3Q9NTG7 399 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-202ENST00000562722 KLHL9Q9P2J3 617 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 ROS1P08922 2347 aa11.54□□□□□ -0.56
SF3B3-202ENST00000562722 SCAMP2O15127 329 aaKnown RBP11.53□□□□□ -0.56
SF3B3-202ENST00000562722 EFNA2O43921 213 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 LYZL6O75951 148 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 SHBGP04278 402 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 KRT16P08779 473 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 KRT4P19013 534 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 ENPP1P22413 925 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 ACVR1BP36896 505 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 CCT3P49368 545 aaKnown RBP11.53□□□□□ -0.56
SF3B3-202ENST00000562722 SUMO3P55854 103 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-202ENST00000562722 KRTAP1-1Q07627 177 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 SELENBP1Q13228 472 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 TOMM34Q15785 309 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-202ENST00000562722 NDUFAF6Q330K2 333 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 KANK2Q63ZY3 851 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 TDRPQ86YL5 185 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 SLC43A2Q8N370 569 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 TOR1AIP2Q8NFQ8 470 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 OR7A2PQ8NGA2 310 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 OR56A1Q8NGH5 318 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 OR2W6PQ8NHA6 318 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 AGR3Q8TD06 166 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 TWIST2Q8WVJ9 160 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 ARL8AQ96BM9 186 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 USB1Q9BQ65 265 aaKnown RBP11.53□□□□□ -0.56
SF3B3-202ENST00000562722 TRMOQ9BU70 441 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 GATA5Q9BWX5 397 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-202ENST00000562722 ACTRT3Q9BYD9 372 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 TXLNGYQ9BZA5 131 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 SLCO5A1Q9H2Y9 848 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 COQ10BQ9H8M1 238 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 L2HGDHQ9H9P8 463 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 FAIMQ9NVQ4 179 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 GIMAP2Q9UG22 337 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 ICAM5Q9UMF0 924 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 DNAJC15Q9Y5T4 150 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 ACTL7BQ9Y614 415 aa11.53□□□□□ -0.56
SF3B3-202ENST00000562722 A0A1W2PNR3 127 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 TMEM233B4DJY2 109 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms