RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 GPR18Q14330 331 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 KIR2DS5Q14953 304 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ACKR1Q16570 336 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 MMEL1Q495T6 779 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ALG10Q5BKT4 473 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 TECRLQ5HYJ1 363 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ALG10BQ5I7T1 473 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ZNF678Q5SXM1 525 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 C6orf52Q5T4I8 152 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 TMEM268Q5VZI3 342 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 PTRHD1Q6GMV3 140 aaKnown RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 RAET1GQ6H3X3 334 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 BRAT1Q6PJG6 821 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 RNF165Q6ZSG1 346 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ZCCHC23Q6ZST2 131 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 GPRIN3Q6ZVF9 776 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 TAS2R42Q7RTR8 314 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 SNX20Q7Z614 316 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 IGFN1Q86VF2 1251 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 SIAH3Q8IW03 269 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 PGAM4Q8N0Y7 254 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 FBXW8Q8N3Y1 598 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ZNF781Q8N8C0 355 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 Q8N9P0 234 aaPredicted RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 SCAIQ8N9R8 606 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 RBM15BQ8NDT2 890 aaKnown RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 DNAAF1Q8NEP3 725 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 LPCAT1Q8NF37 534 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 OR5M9Q8NGP3 310 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 DNAJC9Q8WXX5 260 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 LPGAT1Q92604 370 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 HTRA1Q92743 480 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 NUS1Q96E22 293 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 SCRN2Q96FV2 425 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 DNAJC1Q96KC8 554 aaKnown RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 PPM1MQ96MI6 270 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 PANX3Q96QZ0 392 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 NR1H4Q96RI1 486 aaPredicted RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 SORT1Q99523 831 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 OLFM1Q99784 485 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 SH3GL1Q99961 368 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 C17orf62Q9BQA9 187 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 H2AFJQ9BTM1 129 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 HGH1Q9BTY7 390 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 NPLQ9BXD5 320 aaPredicted RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 NUF2Q9BZD4 464 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 TRIM15Q9C019 465 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 C20orf27Q9GZN8 174 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ATG10Q9H0Y0 220 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 MUC13Q9H3R2 512 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ESRP2Q9H6T0 727 aaKnown RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 ALG9Q9H6U8 611 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 UCK1Q9HA47 277 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 FANCEQ9HB96 536 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 PAPOLBQ9NRJ5 636 aaKnown RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 SLC22A11Q9NSA0 550 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ANKRD10Q9NXR5 420 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 NLKQ9UBE8 527 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 DHCR7Q9UBM7 475 aaKnown RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 EPHA6Q9UF33 1036 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 POLG2Q9UHN1 485 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ZDHHC2Q9UIJ5 367 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 GNPTGQ9UJJ9 305 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 C15orf41Q9Y2V0 281 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 WBP11Q9Y2W2 641 aaKnown RBP2.92□□□□□ -1.94
SPG11-225ENST00000561391 NDUFAF1Q9Y375 327 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 DHRS7Q9Y394 339 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 HS3ST3B1Q9Y662 390 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 ARL5AQ9Y689 179 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 NUP210LQ5VU65 1888 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 CR1P17927 2039 aa2.92□□□□□ -1.94
SPG11-225ENST00000561391 VWFP04275 2813 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 C15orf38-AP3S2A0A0A6YYH1 394 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 A0A0J9YYE9 177 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 GLYATL1P3A0A0U1RQE8 302 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 C1orf232A0A0U1RR37 186 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 A6NLC8 198 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 AGAP14A8MT82 685 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SUPT3HB4E1H0 165 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 E9PBE3 544 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 PSMD11O00231 422 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SLC28A1O00337 649 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 UBFD1O14562 309 aaKnown RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 AIM2O14862 343 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 CASKO14936 926 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 AZIN1O14977 448 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ANGPT2O15123 496 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 RGS14O43566 566 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ZBTB14O43829 449 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 PEX11AO75192 247 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 GUCY1B2O75343 617 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ENTPD5O75356 428 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SUPT3HO75486 399 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 GMNNO75496 209 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 LYPLA1O75608 230 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 NEURL1O76050 574 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ZBTB11O95625 1053 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 TRBC1P01850 177 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 C8GP07360 202 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 CHRNGP07510 517 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms