RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 EEF1A1P68104 462 aaKnown RBP15.12■□□□□ 0.01
SHMT2-231ENST00000557433 BAMBIQ13145 260 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 ACSM3Q53FZ2 586 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 GARNL3Q5VVW2 1013 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 IL20RBQ6UXL0 311 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF836Q6ZNA1 936 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 TMPRSS11FQ6ZWK6 438 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 EID2Q8N6I1 236 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 MFSD9Q8NBP5 474 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 PGLYRP3Q96LB9 341 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 C12orf66Q96MD2 445 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 LRFN5Q96NI6 719 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 TEAD3Q99594 435 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 PRSS27Q9BQR3 290 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 TRMT61BQ9BVS5 477 aaKnown RBP15.12■□□□□ 0.01
SHMT2-231ENST00000557433 DENND4AQ7Z401 1863 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 RIIAD1A6NNX1 92 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 DVL2O14641 736 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 GATBO75879 557 aaKnown RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 ZIC2O95409 532 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 ASGR2P07307 311 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF136P52737 540 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 OR10A3P58181 314 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 DEFB103AP81534 67 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 NOGQ13253 232 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF750Q32MQ0 723 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 C18orf63Q68DL7 685 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 OVCH1Q7RTY7 1134 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 FAM98AQ8NCA5 519 aaKnown RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 OR11H4Q8NGC9 324 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 TMEM239Q8WW34 195 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 NACC2Q96BF6 587 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 ART5Q96L15 291 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 ERMAPQ96PL5 475 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 TIMM29Q9BSF4 260 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 NARFLQ9H6Q4 476 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 DLL4Q9NR61 685 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 C14orf105Q9NVL8 296 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 SPATA2Q9UM82 520 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 TBC1D3EA0A087X179 549 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 FCMRO60667 390 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 ECDO95905 644 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 TGM6O95932 706 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 DBIP07108 87 aaKnown RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 C8orf89P0DMQ9 161 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 TBXA2RP21731 343 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 PRMT2P55345 433 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 RPS7P62081 194 aaKnown RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 FOXK2Q01167 660 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 TAGLNQ01995 201 aaKnown RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 SLC3A1Q07837 685 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 SNTB2Q13425 540 aaKnown RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 KLF9Q13886 244 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 LRRC25Q8N386 305 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 SMIM4Q8WVI0 70 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 VWCEQ96DN2 955 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 C4orf36Q96KX1 117 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 INSM2Q96T92 566 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-231ENST00000557433 TEX101Q9BY14 249 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 PLEKHA1Q9HB21 404 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 NTNG1Q9Y2I2 539 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 MAB21L2Q9Y586 359 aa15.11■□□□□ 0.01
SHMT2-231ENST00000557433 RPS10-NUDT3A0A1W2PQS6 291 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 C4orf51C9J302 202 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 OGG1O15527 345 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 FLRT2O43155 660 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 PRICKLE3O43900 615 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-231ENST00000557433 NTN1O95631 604 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 PCCBP05166 539 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF3P17036 446 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 RPS4Y1P22090 263 aaKnown RBP15.1■□□□□ 0.01
SHMT2-231ENST00000557433 CERS1P27544 350 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 SRP9P49458 86 aaKnown RBP15.1■□□□□ 0.01
SHMT2-231ENST00000557433 AP3S2P59780 193 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 AGERQ15109 404 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 LGALSLQ3ZCW2 172 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-231ENST00000557433 CDONQ4KMG0 1287 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 ETFBKMTQ8IXQ9 262 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 SLC38A6Q8IZM9 456 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 SYS1Q8N2H4 156 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 GIMAP1Q8WWP7 306 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 PTP4A1Q93096 173 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 OMA1Q96E52 524 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 NRTNQ99748 197 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 DPH1Q9BZG8 443 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 ADGRL4Q9HBW9 690 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 SLC6A20Q9NP91 592 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 KLHL1Q9NR64 748 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 IL20RAQ9UHF4 553 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 ZMIZ1Q9ULJ6 1067 aa15.1■□□□□ 0.01
SHMT2-231ENST00000557433 TRABD2BA6NFA1 517 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 RNGTTO60942 597 aaKnown RBP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 PEX14O75381 377 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 OR7A10O76100 309 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 EPXP11678 715 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 CXCL3P19876 107 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 SLC2A5P22732 501 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 CMPK1P30085 196 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 BMP8BP34820 402 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 P2RY2P41231 377 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms