RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 HIPK1Q86Z02 1210 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 MISPQ8IVT2 679 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PSMA8Q8TAA3 256 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CDS1Q92903 461 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CPNE4Q96A23 557 aaPredicted RBP12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PPCDCQ96CD2 204 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PSD2Q9BQI7 771 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TRAF4Q9BUZ4 470 aaPredicted RBP12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 REPIN1Q9BWE0 567 aaKnown RBP12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 BTBD2Q9BX70 525 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 HDHD5Q9BXW7 423 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 BCO1Q9HAY6 547 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GP6Q9HCN6 339 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 DUSP22Q9NRW4 184 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GPATCH2Q9NW75 528 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SH3BP4Q9P0V3 963 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GIMAP2Q9UG22 337 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PRSS50Q9UI38 385 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 DNAJC15Q9Y5T4 150 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 MALRD1Q5VYJ5 2156 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TMEM233B4DJY2 109 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ADAM11O75078 769 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GLRA3O75311 464 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SHBGP04278 402 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CD3EP07766 207 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 YES1P07947 543 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ALOX5P09917 674 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 BCKDHAP12694 445 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ME2P23368 584 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 IDUAP35475 653 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 EIF1P41567 113 aaKnown RBP12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 OR3A2P47893 321 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NAA20P61599 178 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 POU6F2P78424 691 aaPredicted RBP12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ITGADQ13349 1161 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 LASP1Q14847 261 aaKnown RBP12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 P2RY6Q15077 328 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 RNPS1Q15287 305 aaKnown RBP12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TMEM176BQ3YBM2 270 aaPredicted RBP12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TMEM201Q5SNT2 666 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 COX18Q8N8Q8 333 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 HSD17B8Q92506 261 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 STACQ99469 402 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TACO1Q9BSH4 297 aaKnown RBP12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GATA5Q9BWX5 397 aaPredicted RBP12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GRIP2Q9C0E4 1043 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PIGUQ9H490 435 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 HHATLQ9HCP6 504 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GIN1Q9NXP7 522 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ATP6V1HQ9UI12 483 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 KCNE5Q9UJ90 142 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CARD8Q9Y2G2 431 aa12.71□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ARFGEF3Q5TH69 2177 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 HEATR1Q9H583 2144 aaKnown RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 A0A1W2PNR3 127 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SLC28A1O00337 649 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SCDO00767 359 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 AZIN1O14977 448 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SMAD9O15198 467 aaKnown RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 GPRIN2O60269 458 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 DNAJA2O60884 412 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PRKD3O94806 890 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 H6PDO95479 791 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 LINC00032P0C843 101 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PABPC4LP0CB38 370 aaKnown RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 LAMP1P11279 417 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 COX5AP20674 150 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ARRB2P32121 409 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 NTF4P34130 210 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CRHR1P34998 444 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SERPINB4P48594 390 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 P2RX1P51575 399 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 RPL38P63173 70 aaKnown RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PCLAFQ15004 111 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 KANK2Q63ZY3 851 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 C11orf71Q6IPW1 123 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 LRIG3Q6UXM1 1119 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 Q6ZT83 130 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SZRD1Q7Z422 152 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 MTERF4Q7Z6M4 381 aaKnown RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TDRPQ86YL5 185 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 BANPQ8N9N5 519 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 OR7A2PQ8NGA2 310 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ZFP28Q8NHY6 868 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PHOSPHO1Q8TCT1 267 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ZFP90Q8TF47 636 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 MTERF3Q96E29 417 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ZNF300Q96RE9 604 aaPredicted RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 POTEKPQ9BYX7 375 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SERHL2Q9H4I8 314 aa12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ESRP2Q9H6T0 727 aaKnown RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 FANCFQ9NPI8 374 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms