RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ZNF562Q6V9R5 426 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 HSDL2Q6YN16 418 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 Q6ZSR9 355 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 Q6ZVQ6 151 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 NLRP9Q7RTR0 991 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 NET1Q7Z628 596 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 DHDDSQ86SQ9 333 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 MOB3BQ86TA1 216 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 RANBP3LQ86VV4 465 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 TBC1D10CQ8IV04 446 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SLC35F2Q8IXU6 374 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 GPR137CQ8N3F9 429 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 FGFRL1Q8N441 504 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 FAM89BQ8N5H3 189 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CLDN19Q8N6F1 224 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ATP6V0D2Q8N8Y2 350 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 TMEM178AQ8NBL3 297 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 MFSD9Q8NBP5 474 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CHDHQ8NE62 594 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 OR5L2Q8NGL0 311 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 OR4C3Q8NH37 302 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 OR1F12Q8NHA8 337 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 NANPQ8TBE9 248 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SUN5Q8TC36 379 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 FBXO25Q8TCJ0 367 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CD99L2Q8TCZ2 262 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 TSEN15Q8WW01 171 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 ASZ1Q8WWH4 475 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SLCO2A1Q92959 643 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PNPLA2Q96AD5 504 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SGK3Q96BR1 496 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ZNF707Q96C28 371 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 OMA1Q96E52 524 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 C19orf60Q96EN9 201 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PPP1R16AQ96I34 528 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PRRC1Q96M27 445 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CCT8L2Q96SF2 557 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 GAL3ST1Q99999 423 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SYT15Q9BQS2 421 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 RIOK1Q9BRS2 568 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 RPP25Q9BUL9 199 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 SPATA16Q9BXB7 569 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PITPNM3Q9BZ71 974 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CPVLQ9H3G5 476 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 AUNIPQ9H7T9 357 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 GPN2Q9H9Y4 310 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 PLEKHA3Q9HB20 300 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PXMP2Q9NR77 195 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 DCAF13Q9NV06 445 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 IL36GQ9NZH8 169 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 MTCH1Q9NZJ7 389 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CHMP5Q9NZZ3 219 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PRO0461Q9UI25 63 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ZNF639Q9UID6 485 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 MAN1B1Q9UKM7 699 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 IKZF2Q9UKS7 526 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ANGPTL2Q9UKU9 493 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ELF5Q9UKW6 265 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 VANGL2Q9ULK5 521 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 TBC1D24Q9ULP9 559 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PPIAL4AQ9Y536 164 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SELENOKQ9Y6D0 94 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 COL16A1Q07092 1604 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 TRAV25A0A0B4J276 109 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 IGHV4-61A0A0C4DH41 118 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 LOC100653049A0A140TA62 436 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 ERICH2A1L162 156 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 FCN1O00602 326 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CYB561D2O14569 222 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 EIF3HO15372 352 aaKnown RBP eCLIP1.9□□□□□ -2.11
SRP54-204ENST00000553923 RNF113AO15541 343 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 CHMP2AO43633 222 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CDC123O75794 336 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 CDK2AP2O75956 126 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 ATP5LO75964 103 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 OR2J3O76001 311 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 KRT34O76011 436 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CLPXO76031 633 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 DFFBO76075 338 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 IGSF6O95976 241 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 F10P00742 488 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CA1P00915 261 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 CST1P01037 141 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 IGHV4-59P01825 116 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 KRT6AP02538 564 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 OPN1LWP04000 364 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 IGF1P05019 195 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 ERCC1P07992 297 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 TRIM49P0CI25 452 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 TRIM49CP0CI26 452 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 SLC2A2P11168 524 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 GP1BBP13224 206 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 ATP1B2P14415 290 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 ZNF24P17028 368 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 PRKACBP22694 351 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CPN2P22792 545 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CALML3P27482 149 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CD1CP29017 333 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 HMOX2P30519 316 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms