RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CLEC4FQ8N1N0 589 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 TMCO5AQ8N6Q1 288 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 GATSQ8NAP1 163 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 TOR1AIP2Q8NFQ8 470 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 OR2M3Q8NG83 312 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 OR4C3Q8NH37 302 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 B4GALNT2Q8NHY0 566 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 MIPOL1Q8TD10 442 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 OIT3Q8WWZ8 545 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 STON2Q8WXE9 905 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 SDCCAG3Q96C92 435 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 THOC1Q96FV9 657 aaKnown RBP7.57□□□□□ -1.2
PSEN1-209ENST00000553855 TEX37Q96LM6 180 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 TIMP4Q99727 224 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 EBF4Q9BQW3 602 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 UGT2B28Q9BY64 529 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 CHST11Q9NPF2 352 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 CALML5Q9NZT1 146 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 CCDC167Q9P0B6 97 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 TNFRSF10DQ9UBN6 386 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 PLEKHB1Q9UF11 243 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-209ENST00000553855 FBXL2Q9UKC9 423 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 RPH3AQ9Y2J0 694 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-209ENST00000553855 WDR45Q9Y484 360 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 DTNAQ9Y4J8 743 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 NBASA2RRP1 2371 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 WIPF3A6NGB9 483 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 HSPB2A8KAH6 182 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 EVPLLA8MZ36 301 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 C5orf58C9J3I9 102 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 ANGPT2O15123 496 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 SHOXO15266 292 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 CYP7B1O75881 506 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 CLDN14O95500 239 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 ZCCHC18P0CG32 403 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 BMP7P18075 431 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 IL12AP29459 219 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 CHRNB4P30926 498 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 EIF1P41567 113 aaKnown RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 MRPL19P49406 292 aaKnown RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 P2RX1P51575 399 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 CCR4P51679 360 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 CASP9P55211 416 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 SUMO3P55854 103 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 RPS3AP61247 264 aaKnown RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 PHC1P78364 1004 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 SRYQ05066 204 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 CRYZQ08257 329 aaKnown RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 PMPCAQ10713 525 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 ART3Q13508 389 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 MAPRE2Q15555 327 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 HSPB2Q16082 182 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 ARHGAP11BQ3KRB8 267 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 LINC00114Q6XXX2 140 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 EIF3MQ7L2H7 374 aaKnown RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 FGD2Q7Z6J4 655 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 RNF130Q86XS8 419 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 LACC1Q8IV20 430 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 ULK2Q8IYT8 1036 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 FADS6Q8N9I5 356 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 CHDHQ8NE62 594 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 RFWD2Q8NHY2 731 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 VPS33AQ96AX1 596 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 ZBTB8AQ96BR9 441 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 ROPN1LQ96C74 230 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 SPDL1Q96EA4 605 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 C1GALT1C1Q96EU7 318 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 SH3YL1Q96HL8 342 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 RCC1LQ96I51 464 aaKnown RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 TRIB1Q96RU8 372 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 SDF2Q99470 211 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 INPP5KQ9BT40 448 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 TMEM120AQ9BXJ8 343 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 NMUR2Q9GZQ4 415 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 NSRP1Q9H0G5 558 aaKnown RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 ARMC7Q9H6L4 198 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 GP6Q9HCN6 339 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 FLRT3Q9NZU0 649 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 SPRR3Q9UBC9 169 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 P2RX2Q9UBL9 471 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 CORO2BQ9UQ03 480 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 VDAC3Q9Y277 283 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 EMC9Q9Y3B6 208 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 UBR5O95071 2799 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-209ENST00000553855 TENM4Q6N022 2769 aa7.56□□□□□ -1.2
PSEN1-209ENST00000553855 A0A096LPI6 279 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 IGLV3-32A0A0A0MS00 114 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 NPIPA5A0A0B4J1W7 369 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 GJE1A6NN92 205 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 NPIPA7E9PJI5 369 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 H3BML4 177 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 DVL2O14641 736 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF264O43296 627 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 TBX1O43435 398 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 EIF4E2O60573 245 aaKnown RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 CSTAP01040 98 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms