RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 XAGE5Q8WWM1 108 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 ZBTB8AQ96BR9 441 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 TESCQ96BS2 214 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 SLC35A5Q9BS91 424 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 C12orf49Q9H741 205 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 COQ10BQ9H8M1 238 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 ST6GALNAC2Q9UJ37 374 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 TESMINQ9Y4I5 508 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 DTNAQ9Y4J8 743 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 AKAP6Q13023 2319 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 H6PDO95479 791 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 NID1P14543 1247 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 DDX5P17844 614 aaKnown RBP16.3■□□□□ 0.2
SHMT2-206ENST00000553529 EDNRAP25101 427 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 P2RX1P51575 399 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 RAC1P63000 192 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 SORDQ00796 357 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 SKP2Q13309 424 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 QPRTQ15274 297 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 TSC22D1Q15714 1073 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 ARHGAP11BQ3KRB8 267 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 HBMQ6B0K9 141 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 NXNQ6DKJ4 435 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 HEPHL1Q6MZM0 1159 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 OGFOD2Q6N063 350 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.3■□□□□ 0.2
SHMT2-206ENST00000553529 RNF130Q86XS8 419 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 KIF18BQ86Y91 864 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 ANKFN1Q8N957 763 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 GOT1L1Q8NHS2 421 aaPredicted RBP16.3■□□□□ 0.2
SHMT2-206ENST00000553529 ACTRT2Q8TDY3 377 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 HS3ST6Q96QI5 342 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 THUMPD3Q9BV44 507 aaKnown RBP16.3■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF350Q9GZX5 532 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 PIGMQ9H3S5 423 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 PLEKHF2Q9H8W4 249 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 FOXD3Q9UJU5 478 aaPredicted RBP16.3■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF175Q9Y473 711 aa16.3■□□□□ 0.2
SHMT2-206ENST00000553529 A0A087WZY1 265 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 PRSS51A0A1B0GVH4 220 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 C7orf72A4D263 438 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 SERINC4A6NH21 518 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 GTPBP1O00178 669 aaKnown RBP16.29■□□□□ 0.2
SHMT2-206ENST00000553529 MSTNO14793 375 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 ADAMDEC1O15204 470 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 UBTFL6P0CB48 400 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-206ENST00000553529 UBL4AP11441 157 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 UQCRC2P22695 453 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 S100A3P33764 101 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 RPS3AP61247 264 aaKnown RBP16.29■□□□□ 0.2
SHMT2-206ENST00000553529 CHRNEQ04844 493 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 SYPL1Q16563 259 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 TMEM176BQ3YBM2 270 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-206ENST00000553529 TTMPQ5BVD1 217 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 FBXW10Q5XX13 1052 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 FRRS1Q6ZNA5 592 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 OSTF1Q92882 214 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 MOAP1Q96BY2 351 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 LRRC46Q96FV0 321 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 KLHL15Q96M94 604 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 PRRG4Q9BZD6 226 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 ACBD3Q9H3P7 528 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 MANSC1Q9H8J5 431 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 THAP1Q9NVV9 213 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 F8P00451 2351 aa16.29■□□□□ 0.2
SHMT2-206ENST00000553529 SPG11Q96JI7 2443 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 DEFB108AA8MXU0 73 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 HMGN4O00479 90 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 HDAC3O15379 428 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 CHRM4P08173 479 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 POU2F1P14859 743 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 ENPP1P22413 925 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 LCN1P31025 176 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 UGT2B10P36537 528 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 CD79BP40259 229 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 KCNJ5P48544 419 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 EEFSECP57772 596 aaKnown RBP16.28■□□□□ 0.2
SHMT2-206ENST00000553529 MAPK11Q15759 364 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF141Q15928 474 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF239Q16600 458 aaKnown RBP16.28■□□□□ 0.2
SHMT2-206ENST00000553529 OR2A2Q6IF42 318 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 FAM214BQ7L5A3 538 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 C16orf62Q7Z3J2 963 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 NUFIP2Q7Z417 695 aaKnown RBP16.28■□□□□ 0.2
SHMT2-206ENST00000553529 MISPQ8IVT2 679 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 NATD1Q8N6N6 113 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 ROPN1LQ96C74 230 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 NEURL3Q96EH8 262 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 DTNBP1Q96EV8 351 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 CCDC115Q96NT0 180 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 KLHL4Q9C0H6 718 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 SLCO1B3Q9NPD5 702 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 PROCRQ9UNN8 238 aa16.28■□□□□ 0.2
SHMT2-206ENST00000553529 PRRC2AP48634 2157 aaKnown RBP16.28■□□□□ 0.2
SHMT2-206ENST00000553529 ANKHD1Q8IWZ3 2542 aaKnown RBP16.27■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF469Q96JG9 3925 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-206ENST00000553529 CCDC154A6NI56 674 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 LINC01387J3KSC0 135 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 AP3D1O14617 1153 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF264O43296 627 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms