RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 FTH1P02794 183 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 WNT2P09544 360 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 PATE4P0C8F1 98 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 OR8G3PP0DMU2 310 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 GCAP28676 217 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 GNA11P29992 359 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 RDXP35241 583 aaKnown RBP4.78□□□□□ -1.64
SCFD1-208ENST00000553278 SPRP35270 261 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-208ENST00000553278 RIDAP52758 137 aaKnown RBP4.78□□□□□ -1.64
SCFD1-208ENST00000553278 TMEM50BP56557 158 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 RPL8P62917 257 aaKnown RBP4.78□□□□□ -1.64
SCFD1-208ENST00000553278 KLRB1Q12918 225 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 IFT88Q13099 833 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 MS4A18Q3C1V0 323 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 FAM219BQ5XKK7 198 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 PAQR6Q6TCH4 344 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 UQCC3Q6UW78 93 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 ZNF321PQ8N8H1 164 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 OR2T6Q8NHC8 308 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 RAPGEF5Q92565 580 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 MOCOSQ96EN8 888 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 PANX1Q96RD7 426 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 CCT8L2Q96SF2 557 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 BPIFA3Q9BQP9 254 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 SYT15Q9BQS2 421 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 DPH7Q9BTV6 452 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 NARFLQ9H6Q4 476 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 AUNIPQ9H7T9 357 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 NT5MQ9NPB1 228 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 PSMC3IPQ9P2W1 217 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-208ENST00000553278 SLC7A8Q9UHI5 535 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 SCML2Q9UQR0 700 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 PYGO1Q9Y3Y4 419 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 IGHV2-70DA0A0C4DH43 119 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 A0A1B0GTQ1 180 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 MPTX1A8MV57 137 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 H3BMQ9 156 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 K7EQG2 157 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 RAMP3O60896 148 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 NTN1O95631 604 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 CD1CP29017 333 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 CDH5P33151 784 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-208ENST00000553278 OR1G1P47890 313 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 STARP49675 285 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 CDH6P55285 790 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 PLP1P60201 277 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 RND3P61587 244 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 SPAG1Q07617 926 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 DOC2AQ14183 400 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 CRMP1Q14194 572 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 ZNF146Q15072 292 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 CYP51A1Q16850 503 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 TEX44Q53QW1 395 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 MS4A13Q5J8X5 152 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 MEDAGQ5VYS4 303 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 GDPGP1Q6ZNW5 385 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 PRSS48Q7RTY5 328 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 MTURNQ8N3F0 131 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 GTPBP8Q8N3Z3 284 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-208ENST00000553278 KIR3DL3Q8N743 410 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 OR4D9Q8NGE8 314 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 C11orf45Q8TAV5 145 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 MAGEE2Q8TD90 523 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-208ENST00000553278 ANKRD49Q8WVL7 239 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 SLC38A4Q969I6 547 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 F2RL3Q96RI0 385 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 IL4I1Q96RQ9 567 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 CLCC1Q96S66 551 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 RAB34Q9BZG1 259 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 PARLQ9H300 379 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 SUDS3Q9H7L9 328 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-208ENST00000553278 VCPKMTQ9H867 229 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 MEPEQ9NQ76 525 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-208ENST00000553278 MLXQ9UH92 298 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 MRPS28Q9Y2Q9 187 aaKnown RBP4.77□□□□□ -1.65
SCFD1-208ENST00000553278 PEX16Q9Y5Y5 336 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 SCN5AQ14524 2016 aa4.77□□□□□ -1.65
SCFD1-208ENST00000553278 SALL1Q9NSC2 1324 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 FER1L5A0AVI2 2057 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 IGHV4-30-2A0A087WSY4 118 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 TEX48A0A1B0GUV7 120 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 FRG2CA6NGY1 282 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 SUPT3HB4E1H0 165 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 RGS16O15492 202 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-208ENST00000553278 ATP5LO75964 103 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 SLITRK3O94933 977 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 HPP00738 406 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 SERPINA2P20848 420 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 ANOS1P23352 680 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 ARHGDIAP52565 204 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 EIF3EP60228 445 aaKnown RBP4.76□□□□□ -1.65
SCFD1-208ENST00000553278 GNB1P62873 340 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 RPL36AP83881 106 aaKnown RBP4.76□□□□□ -1.65
SCFD1-208ENST00000553278 GK3PQ14409 553 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 MICBQ29980 383 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 FAM76BQ5HYJ3 339 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 DMRTC1Q5HYR2 192 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 LGSNQ5TDP6 509 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 TTC19Q6DKK2 380 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms