RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SHOX2O60902 331 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 NME6O75414 186 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 TNFRSF21O75509 655 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 PGM3O95394 542 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 EPPINO95925 133 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 BCHEP06276 602 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 C8BP07358 591 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 COX4I1P13073 169 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 GP1BBP13224 206 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 BMP7P18075 431 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 RPS4Y1P22090 263 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 CHRNB4P30926 498 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 MVDP53602 400 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 SEC24CP53992 1094 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 CHRNEQ04844 493 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 CRYZQ08257 329 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 SELENBP1Q13228 472 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 SCARB2Q14108 478 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 SYPL1Q16563 259 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC25A53Q5H9E4 307 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF311Q5JNZ3 666 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 PAGE3Q5JUK9 113 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 WIPI1Q5MNZ9 446 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 C1orf185Q5T7R7 199 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 RIPPLY2Q5TAB7 128 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 FAM91A1Q658Y4 838 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 OR5M10Q6IEU7 315 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 CGB2Q6NT52 195 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 C3orf33Q6P1S2 294 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF585AQ6P3V2 769 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 C5orf46Q6UWT4 87 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 CLEC18BQ6UXF7 455 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 MAMDC2Q7Z304 686 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 YRDCQ86U90 279 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 SNX32Q86XE0 403 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 ULK2Q8IYT8 1036 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 CLEC18CQ8NCF0 446 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 OR52P1PQ8NH57 321 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF563Q8TA94 476 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC26A7Q8TE54 656 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 NUDT8Q8WV74 236 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 LZICQ8WZA0 190 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 WNT2BQ93097 391 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 ZHX1-C8orf76Q96EF9 292 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 TMEM19Q96HH6 336 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 UGT2B28Q9BY64 529 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 SERHL2Q9H4I8 314 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 KAT8Q9H7Z6 458 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 ACER3Q9NUN7 267 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 MED17Q9NVC6 651 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 ALKBH4Q9NXW9 302 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 FOXD3Q9UJU5 478 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 FBXL2Q9UKC9 423 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 BAG5Q9UL15 447 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 MCTS1Q9ULC4 181 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 ICAM5Q9UMF0 924 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 CAMK2AQ9UQM7 478 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 CARD8Q9Y2G2 431 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF175Q9Y473 711 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 KLF2Q9Y5W3 355 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 FLNCQ14315 2725 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 DSPPQ9NZW4 1301 aa9.31□□□□□ -0.92
TRAFD1-208ENST00000552890 SPTBN1Q01082 2364 aaKnown RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 LOC100653049A0A140TA62 436 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 WIPF3A6NGB9 483 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SYT5O00445 386 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 DVL2O14641 736 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 DNPH1O43598 174 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 CYP7B1O75881 506 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 KRT34O76011 436 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SYNGR4O95473 234 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 IL18BPO95998 194 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 UBTFL6P0CB48 400 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 HOXB9P17482 250 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC7A1P30825 629 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 PCGF2P35227 344 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 OPRM1P35372 400 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC1A3P43003 542 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 CCR4P51679 360 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 NCALDP61601 193 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 CSNK2A1P68400 391 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF117Q03924 483 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SKP2Q13309 424 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 C3AR1Q16581 482 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SGCBQ16585 318 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 PLPPR5Q32ZL2 321 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC25A35Q3KQZ1 300 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 COX20Q5RI15 118 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 C1QL3Q5VWW1 255 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 NSUN5P2Q63ZY6 315 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 REP15Q6BDI9 236 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 NANOGP8Q6NSW7 305 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 APOOLQ6UXV4 268 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 GRINAQ7Z429 371 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 NET1Q7Z628 596 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 FJX1Q86VR8 437 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 RANBP3LQ86VV4 465 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 ARMC8Q8IUR7 673 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 CLEC4FQ8N1N0 589 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms