RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 UPRTQ96BW1 309 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 BPIFA2Q96DR5 249 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 ZNF333Q96JL9 665 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 AGAP4Q96P64 663 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 OPALINQ96PE5 141 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 FMO2Q99518 471 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 MAP3K3Q99759 626 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 ZNF251Q9BRH9 671 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 MAP1LC3CQ9BXW4 147 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 ANKRD19PQ9H560 264 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 WDR55Q9H6Y2 383 aaPredicted RBP3.74□□□□□ -1.81
USP44-208ENST00000552440 VIPAS39Q9H9C1 493 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 PNRC2Q9NPJ4 139 aaKnown RBP3.74□□□□□ -1.81
USP44-208ENST00000552440 C8orf4Q9NR00 106 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 RNF146Q9NTX7 359 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 FOXJ2Q9P0K8 574 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 ABCD2Q9UBJ2 740 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 POLKQ9UBT6 870 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 DAPK2Q9UIK4 370 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 LNPEPQ9UIQ6 1025 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 FZR1Q9UM11 496 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 PEX16Q9Y5Y5 336 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 COLEC10Q9Y6Z7 277 aa3.74□□□□□ -1.81
USP44-208ENST00000552440 PPRC1Q5VV67 1664 aaKnown RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 IQSEC2Q5JU85 1478 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 FHAD1B1AJZ9 1412 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 MED19A0JLT2 244 aaPredicted RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 BCLAF3A2AJT9 711 aaKnown RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 ERI2A8K979 691 aaKnown RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 ZNF732B4DXR9 585 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 NPIPA7E9PJI5 369 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 H3BMH7 237 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 MID1O15344 667 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 CHST1O43916 411 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 ENTPD5O75356 428 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 RBMXL2O75526 392 aaKnown RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 B3GAT3O94766 335 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 NR3C1P04150 777 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 IGF1P05019 195 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 CTXN2P0C2S0 81 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 CT62P0C5K7 136 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 NPIPA8P0DM63 369 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 MYL2P10916 166 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 PSKH1P11801 424 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 KITLGP21583 273 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 GPX3P22352 226 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 DCKP27707 260 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 TACR3P29371 465 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 UGT2B10P36537 528 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 FEN1P39748 380 aaKnown RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 PLA2G5P39877 138 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 AQP2P41181 271 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 P2RY1P47900 373 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 CCR8P51685 355 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 SGSHP51688 502 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 CEBPGP53567 150 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 FOXF2Q12947 444 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 CHI3L2Q15782 390 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 EXOC3L4Q17RC7 722 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 MTX3Q5HYI7 312 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 FAM122CQ6P4D5 195 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 LINGO4Q6UY18 593 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 ZNF562Q6V9R5 426 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 TMEM64Q6YI46 380 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 TMEM184AQ6ZMB5 413 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 C17orf107Q6ZR85 190 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 SHFQ7M4L6 423 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 HDDC2Q7Z4H3 204 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 MOB3BQ86TA1 216 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 TMEM17Q86X19 198 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 MARCH9Q86YJ5 346 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 SYS1Q8N2H4 156 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 ZNF786Q8N393 782 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 CPSF7Q8N684 471 aaKnown RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 CSNK1A1LQ8N752 337 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 INO80EQ8NBZ0 244 aaPredicted RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 NECAP1Q8NC96 275 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 ZNF680Q8NEM1 530 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 OR11H4Q8NGC9 324 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 CCDC26Q8TAB7 109 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 FAM110BQ8TC76 370 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 TCP10LQ8TDR4 215 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 TMEM239Q8WW34 195 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 IRGQQ8WZA9 623 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 NR4A3Q92570 626 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 ZBTB9Q96C00 473 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 SNF8Q96H20 258 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 B3GALT6Q96L58 329 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 JSRP1Q96MG2 331 aaPredicted RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 NSMCE3Q96MG7 304 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 SPRY4Q9C004 299 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 ARRDC1-AS1Q9H2J1 176 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 C1orf198Q9H425 327 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 PRSS16Q9NQE7 514 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 ZNF701Q9NV72 531 aaPredicted RBP3.73□□□□□ -1.81
USP44-208ENST00000552440 C2orf42Q9NWW7 574 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 TINAGQ9UJW2 476 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 NPIPA1Q9UND3 350 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 FKBP7Q9Y680 259 aa3.73□□□□□ -1.81
USP44-208ENST00000552440 YEATS2Q9ULM3 1422 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms