RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SLC19A2O60779 497 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 RFPL3O75679 317 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3HP0C7X1 549 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 GPR89BP0CG08 455 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 SAGP10523 405 aaPredicted RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 BMP7P18075 431 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 FCARP24071 287 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 THBS2P35442 1172 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 FOXK2Q01167 660 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TNFRSF17Q02223 184 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 EXOSC7Q15024 291 aaKnown RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3GQ6DHY5 549 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3CQ6IPX1 549 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3Q8IZP1 549 aaPredicted RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 OR2L13Q8N349 312 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 RFLNBQ8N5W9 214 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 OR52L1Q8NGH7 329 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 OR5M3Q8NGP4 307 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 GAL3ST3Q96A11 431 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 CITED4Q96RK1 184 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 ABHD1Q96SE0 405 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TEAD3Q99594 435 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 SARGQ9BW04 601 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 CCDC86Q9H6F5 360 aaKnown RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 CACYBPQ9HB71 228 aaKnown RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 TRPV5Q9NQA5 729 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 CYSLTR2Q9NS75 346 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 ING3Q9NXR8 418 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 ZMIZ1Q9ULJ6 1067 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TMA7Q9Y2S6 64 aaKnown RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 EYSQ5T1H1 3165 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 LOC105369274A0A096LPK9 316 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 SLC43A1O75387 559 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 C1QBP02746 253 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 MTNR1BP49286 362 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 RIN1Q13671 783 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 TMEM240Q5SV17 173 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 BCL2L15Q5TBC7 163 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 HBMQ6B0K9 141 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 ZAR1Q86SH2 424 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 RANBP3LQ86VV4 465 aaPredicted RBP14.65□□□□□ -0.06
LDLR-204ENST00000545707 GID4Q8IVV7 300 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 OR4N4Q8N0Y3 316 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 TMEM52Q8NDY8 209 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 BRIX1Q8TDN6 353 aaKnown RBP14.65□□□□□ -0.06
LDLR-204ENST00000545707 C4orf36Q96KX1 117 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 IRF2BPLQ9H1B7 796 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 ABCG5Q9H222 651 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 KCNN2Q9H2S1 579 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 ADAM30Q9UKF2 790 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 A0A0A6YYJ9 748 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 OR2B3O76000 313 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 C5AR1P21730 350 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 RPS21P63220 83 aaKnown RBP14.65□□□□□ -0.06
LDLR-204ENST00000545707 RGS1Q08116 209 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 DUSP8Q13202 625 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 GALEQ14376 348 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 FAM205BPQ63HN1 556 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 MTFR2Q6P444 385 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 SFXN4Q6P4A7 337 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 SSX6Q7RTT6 188 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 ARL14Q8N4G2 192 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 OR5T3Q8NGG3 340 aa14.65□□□□□ -0.06
LDLR-204ENST00000545707 MEPEQ9NQ76 525 aaPredicted RBP14.65□□□□□ -0.06
LDLR-204ENST00000545707 ZNF624Q9P2J8 865 aaPredicted RBP14.65□□□□□ -0.06
LDLR-204ENST00000545707 DENND4AQ7Z401 1863 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 GRXCR1A8MXD5 290 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 PRR23D1E9PI22 279 aaPredicted RBP14.64□□□□□ -0.07
LDLR-204ENST00000545707 TSC22D2O75157 780 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 LYPD3O95274 346 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 PRR23D2P0DMB1 279 aaPredicted RBP14.64□□□□□ -0.07
LDLR-204ENST00000545707 LAMP2P13473 410 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 ARFIP1P53367 373 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 CRMP1Q14194 572 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 DCST2Q5T1A1 773 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 ZNF614Q8N883 585 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 OR51L1Q8NGJ5 315 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 OR10G6Q8NH81 332 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 ABHD4Q8TB40 342 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 TSACCQ96A04 125 aaPredicted RBP14.64□□□□□ -0.07
LDLR-204ENST00000545707 RFT1Q96AA3 541 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 BPIFA2Q96DR5 249 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 TRIM36Q9NQ86 728 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 MAT2BQ9NZL9 334 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 MRPS7Q9Y2R9 242 aaKnown RBP14.64□□□□□ -0.07
LDLR-204ENST00000545707 A0A1W2PRG6 482 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 GXYLT2A0PJZ3 443 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 SLC9B1P1A6NJY1 282 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 SLC35G6P0C7Q6 338 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 CPMP14384 443 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 CFL1P23528 166 aaKnown RBP14.64□□□□□ -0.07
LDLR-204ENST00000545707 NDUFS1P28331 727 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 SLC6A1P30531 599 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 TALDO1P37837 337 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 TSFMP43897 325 aaKnown RBP14.64□□□□□ -0.07
LDLR-204ENST00000545707 PPP2CBP62714 309 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 PPP2CAP67775 309 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 PLAURQ03405 335 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 FCN2Q15485 313 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 ESPNLQ6ZVH7 1005 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms