RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ESPNLQ6ZVH7 1005 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 OLIG3Q7RTU3 272 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 GGNQ86UU5 652 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 GCNT2Q8N0V5 402 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 ARFGAP2Q8N6H7 521 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 METTL25Q8N6Q8 603 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 GPR119Q8TDV5 335 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 ZFP90Q8TF47 636 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 RNASE6Q93091 150 aaKnown RBP14.16□□□□□ -0.14
CCDC78-216ENST00000544996 C14orf79Q96F83 325 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 SIKE1Q9BRV8 207 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 LAT2Q9GZY6 243 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 RABEP2Q9H5N1 569 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 TPT1P8Q9HAU6 139 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 KCNE5Q9UJ90 142 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 SLC35A3Q9Y2D2 325 aa14.16□□□□□ -0.14
CCDC78-216ENST00000544996 GJE1A6NN92 205 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 UBTFL6P0CB48 400 aaPredicted RBP14.15□□□□□ -0.14
CCDC78-216ENST00000544996 FCGR2AP12318 317 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 CRATP43155 626 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 CHRNEQ04844 493 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 FUT5Q11128 374 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 FOXF1Q12946 379 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 MYBPHQ13203 477 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 SKP2Q13309 424 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 GNA13Q14344 377 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 FGFBP1Q14512 234 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 SQLEQ14534 574 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 PON3Q15166 354 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 COX20Q5RI15 118 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 BLOC1S3Q6QNY0 202 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 FRRS1Q6ZNA5 592 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 LRRC74BQ6ZQY2 392 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 ZNF295-AS1Q8N0V1 137 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 LILRA2Q8N149 483 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 ANKFN1Q8N957 763 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 FBXO27Q8NI29 283 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 FNDC9Q8TBE3 224 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 POC1BQ8TC44 478 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 STON2Q8WXE9 905 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 TMEM234Q8WY98 164 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 FIG4Q92562 907 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 ARSGQ96EG1 525 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 ZNF845Q96IR2 970 aaPredicted RBP14.15□□□□□ -0.14
CCDC78-216ENST00000544996 MRGPRX4Q96LA9 322 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 THUMPD3Q9BV44 507 aaKnown RBP14.15□□□□□ -0.14
CCDC78-216ENST00000544996 PRRG4Q9BZD6 226 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 PIGMQ9H3S5 423 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 TMEM185BQ9H7F4 350 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 MTHFD2LQ9H903 347 aaPredicted RBP14.15□□□□□ -0.14
CCDC78-216ENST00000544996 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.15□□□□□ -0.14
CCDC78-216ENST00000544996 SLC6A13Q9NSD5 602 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 ZNF446Q9NWS9 450 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 THUMPD1Q9NXG2 353 aaKnown RBP14.15□□□□□ -0.14
CCDC78-216ENST00000544996 CCDC167Q9P0B6 97 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 KCNN3Q9UGI6 736 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 MCTS1Q9ULC4 181 aaKnown RBP14.15□□□□□ -0.14
CCDC78-216ENST00000544996 TRIM33Q9UPN9 1127 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 L3MBTL1Q9Y468 752 aa14.15□□□□□ -0.14
CCDC78-216ENST00000544996 CENPVL1A0A0U1RR11 272 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 PRAMEF27A3QJZ7 478 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 TMEM247A6NEH6 219 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 NR5A2O00482 541 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 ADAMDEC1O15204 470 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 EDF1O60869 148 aaKnown RBP14.14□□□□□ -0.15
CCDC78-216ENST00000544996 SYNGR4O95473 234 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 C1QCP02747 245 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 OPN1LWP04000 364 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 PRKCAP17252 672 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 NCF2P19878 526 aaPredicted RBP14.14□□□□□ -0.15
CCDC78-216ENST00000544996 PGCP20142 388 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 CPA2P48052 419 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 ATP4BP51164 291 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 KCNJ10P78508 379 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 QPRTQ15274 297 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 MAPK14Q16539 360 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 SYPL1Q16563 259 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 HBMQ6B0K9 141 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 PPP4R4Q6NUP7 873 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 SLC2A7Q6PXP3 512 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 KIF18BQ86Y91 864 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 CNEP1R1Q8N9A8 125 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 OR10D3Q8NH80 312 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 GTF2H4Q92759 462 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 PMM1Q92871 262 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 SPDL1Q96EA4 605 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 THOC1Q96FV9 657 aaKnown RBP14.14□□□□□ -0.15
CCDC78-216ENST00000544996 NPAS1Q99742 590 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 KLHDC3Q9BQ90 382 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 ZNF559Q9BR84 538 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 RAD21L1Q9H4I0 556 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 NPHS2Q9NP85 383 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 TIGARQ9NQ88 270 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 CALML5Q9NZT1 146 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 P2RX2Q9UBL9 471 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 DCTN4Q9UJW0 460 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 PACSIN3Q9UKS6 424 aa14.14□□□□□ -0.15
CCDC78-216ENST00000544996 NUP214P35658 2090 aaPredicted RBP14.13□□□□□ -0.15
CCDC78-216ENST00000544996 CELSR2Q9HCU4 2923 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms