RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 SPTAN1Q13813 2472 aaKnown RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 A0A087WZY1 265 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 A0A1W2PP18 115 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 C7orf72A4D263 438 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 AGAP5A6NIR3 686 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 H0Y3Z8 333 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 GTPBP1O00178 669 aaKnown RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 CLIC1O00299 241 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 ZNF264O43296 627 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 RCBTB2O95199 551 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 ANP32DO95626 131 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 NTN1O95631 604 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 AGR2O95994 175 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 SNRPB2P08579 225 aaKnown RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 VIMP08670 466 aaKnown RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 UBTFL6P0CB48 400 aaPredicted RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 NR2F1P10589 423 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 PEPDP12955 493 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 PRKCAP17252 672 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 POU3F2P20265 443 aaPredicted RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 CRATP43155 626 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 P2RX1P51575 399 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 DLX5P56178 289 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 FGFBP1Q14512 234 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 RGNQ15493 299 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 CTU2Q2VPK5 515 aaKnown RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 HSP90B2PQ58FF3 399 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 ATAD3BQ5T9A4 648 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 LRRC74BQ6ZQY2 392 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 LACC1Q8IV20 430 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 ZNF295-AS1Q8N0V1 137 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 ZNF619Q8N2I2 560 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 ARFGAP2Q8N6H7 521 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 FAM71CQ8NEG0 241 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 OR5W2Q8NH69 310 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 FBXO27Q8NI29 283 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 CNOT9Q92600 299 aaKnown RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 WNT2BQ93097 391 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 MAL2Q969L2 176 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 ADGRG7Q96K78 797 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 THUMPD3Q9BV44 507 aaKnown RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 TRIM8Q9BZR9 551 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 LAT2Q9GZY6 243 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 TMEM185BQ9H7F4 350 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 MTHFD2LQ9H903 347 aaPredicted RBP8.76□□□□□ -1.01
YBX3-212ENST00000542002 POLE3Q9NRF9 147 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 RLIMQ9NVW2 624 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 TMEM45AQ9NWC5 275 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 LIPT1Q9Y234 373 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 CHST2Q9Y4C5 530 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 AP4B1Q9Y6B7 739 aa8.76□□□□□ -1.01
YBX3-212ENST00000542002 FBN2P35556 2912 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 A0A0J9YW62 118 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 HSPB2A8KAH6 182 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 H3BNH8 94 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 LINC01387J3KSC0 135 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 ETV2O00321 342 aaPredicted RBP8.75□□□□□ -1.01
YBX3-212ENST00000542002 FBP2O00757 339 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 ADAMDEC1O15204 470 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 SEC14L5O43304 696 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 EIF4E2O60573 245 aaKnown RBP8.75□□□□□ -1.01
YBX3-212ENST00000542002 CYP7B1O75881 506 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 CSTAP01040 98 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 UBL4AP11441 157 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 ZNF17P17021 662 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 IGFBP2P18065 325 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 BMP5P22003 454 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 RPS4Y1P22090 263 aaKnown RBP8.75□□□□□ -1.01
YBX3-212ENST00000542002 GCKP35557 465 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 SLC6A8P48029 635 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 ZNF41P51814 821 aaPredicted RBP8.75□□□□□ -1.01
YBX3-212ENST00000542002 ARFIP2P53365 341 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 GYS2P54840 703 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 DSTNP60981 165 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 RAC1P63000 192 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 KCNJ10P78508 379 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 FOXF1Q12946 379 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 SNTB1Q13884 538 aaKnown RBP8.75□□□□□ -1.01
YBX3-212ENST00000542002 SELPLGQ14242 412 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 QPRTQ15274 297 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 HSPB2Q16082 182 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 ADRM1Q16186 407 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 RUNDC3AQ59EK9 446 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 RPS26P11Q5JNZ5 115 aaPredicted RBP8.75□□□□□ -1.01
YBX3-212ENST00000542002 METTL21CQ5VZV1 264 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 EIF3MQ7L2H7 374 aaKnown RBP8.75□□□□□ -1.01
YBX3-212ENST00000542002 VRK2Q86Y07 508 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 LILRA2Q8N149 483 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 SMPDL3BQ92485 455 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 ZBTB8AQ96BR9 441 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 INTS12Q96CB8 462 aaKnown RBP8.75□□□□□ -1.01
YBX3-212ENST00000542002 TREX2Q9BQ50 279 aaPredicted RBP8.75□□□□□ -1.01
YBX3-212ENST00000542002 SIKE1Q9BRV8 207 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 ENKD1Q9H0I2 346 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 CHST11Q9NPF2 352 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 KCNJ16Q9NPI9 418 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 SAR1AQ9NR31 198 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 GMEB1Q9Y692 573 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 CSMD1Q96PZ7 3565 aa8.75□□□□□ -1.01
YBX3-212ENST00000542002 DSPPQ9NZW4 1301 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms