RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 CAPZBP47756 277 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 MAZP56270 477 aaKnown RBP16.56■□□□□ 0.24
GNE-204ENST00000539208 FOXK2Q01167 660 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 STX4Q12846 297 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 FZD5Q13467 585 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 ELOCQ15369 112 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 ZNF141Q15928 474 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 PRPF38BQ5VTL8 546 aaKnown RBP16.56■□□□□ 0.24
GNE-204ENST00000539208 ARL14Q8N4G2 192 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 SIRT6Q8N6T7 355 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 RNF217Q8TC41 542 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 SPRYD4Q8WW59 207 aaPredicted RBP16.56■□□□□ 0.24
GNE-204ENST00000539208 ZNF578Q96N58 590 aaPredicted RBP16.56■□□□□ 0.24
GNE-204ENST00000539208 FLRT3Q9NZU0 649 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 BAIAP2Q9UQB8 552 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 TMEM131Q92545 1883 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 A0A1B0GWA3 101 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 HRO43593 1189 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 NSA2O95478 260 aaKnown RBP16.55■□□□□ 0.24
GNE-204ENST00000539208 IGKV1D-16P01601 117 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 PAICSP22234 425 aaKnown RBP16.55■□□□□ 0.24
GNE-204ENST00000539208 TGM4P49221 684 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 RNF144AP50876 292 aaPredicted RBP16.55■□□□□ 0.24
GNE-204ENST00000539208 ZNF79Q15937 498 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 ACBD7Q8N6N7 88 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 OR6C4Q8NGE1 309 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 CHAC2Q8WUX2 184 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 TXNDC15Q96J42 360 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 SRRQ9GZT4 340 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 MIXL1Q9H2W2 232 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 INPP5EQ9NRR6 644 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 HCN3Q9P1Z3 774 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 IGHV1OR15-9A0A0B4J2B8 117 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 LILRA5A6NI73 299 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 NPIPB9F8W1W9 429 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 CLDN4O14493 209 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 CD300CQ08708 224 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 GLYR1Q49A26 553 aaPredicted RBP16.55■□□□□ 0.24
GNE-204ENST00000539208 DESI1Q6ICB0 168 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 CCBE1Q6UXH8 406 aaPredicted RBP16.55■□□□□ 0.24
GNE-204ENST00000539208 LINC00114Q6XXX2 140 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 THSD4Q6ZMP0 1018 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 TSTD1Q8NFU3 115 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 OR51G2Q8NGK0 314 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 OR13C2Q8NGS9 318 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 MAP3K3Q99759 626 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 IFT27Q9BW83 186 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.55■□□□□ 0.24
GNE-204ENST00000539208 ABCB9Q9NP78 766 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 PRTFDC1Q9NRG1 225 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 C14orf119Q9NWQ9 140 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 MUTYHQ9UIF7 546 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 POLHQ9Y253 713 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 CLDN16Q9Y5I7 305 aa16.55■□□□□ 0.24
GNE-204ENST00000539208 A0A1W2PQL4 384 aaPredicted RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 SLC22A31A6NKX4 558 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 TTC36A6NLP5 189 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 LRRTM2O43300 516 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 PROS1P07225 676 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 SAGP10523 405 aaPredicted RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 SRFP11831 508 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 NME1P15531 152 aaKnown RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 CELP19835 753 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 GABRA4P48169 554 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 PSMD4P55036 377 aaKnown RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 FGFBP1Q14512 234 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 ZNF791Q3KP31 576 aaPredicted RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 DDI2Q5TDH0 399 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 ZC3H14Q6PJT7 736 aaKnown RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 XKRXQ6PP77 449 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 ZNF550Q7Z398 422 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 GKN2Q86XP6 184 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 CMIPQ8IY22 773 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 TDHQ8IZJ6 230 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 OR8H2Q8N162 312 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 ZNF687Q8N1G0 1237 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 ZFP41Q8N8Y5 198 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 OR4N2Q8NGD1 307 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 DNAJA4Q8WW22 397 aaPredicted RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 PTP4A1Q93096 173 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 KISS1RQ969F8 398 aaPredicted RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 PEX11GQ96HA9 241 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 G6PC3Q9BUM1 346 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 RERGLQ9H628 205 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 CAPN10Q9HC96 672 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 C2orf42Q9NWW7 574 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 TBC1D24Q9ULP9 559 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 SLC35A3Q9Y2D2 325 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 SPTBN5Q9NRC6 3674 aaKnown RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 PRR23D1E9PI22 279 aaPredicted RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 SNPHO15079 494 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 PRAMEF2O60811 474 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 RFPL3O75679 317 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 PRR23D2P0DMB1 279 aaPredicted RBP16.54■□□□□ 0.24
GNE-204ENST00000539208 SSTR4P31391 388 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 GPR3P46089 330 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 SLC35F1Q5T1Q4 408 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 SYT14Q8NB59 555 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 SLC37A3Q8NCC5 494 aa16.54■□□□□ 0.24
GNE-204ENST00000539208 GRHL3Q8TE85 626 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms