RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 NRMQ8IXM6 262 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 LRRC56Q8IYG6 542 aaPredicted RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 LGI4Q8N135 537 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TOR1AIP2Q8NFQ8 470 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 OR52N5Q8NH56 324 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 CNBD2Q96M20 576 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 RPS6KA6Q9UK32 745 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 SLC7A7Q9UM01 511 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 KCNMB2Q9Y691 235 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 SCN8AQ9UQD0 1980 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 A0A0A6YYD5 115 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 A0A0G2JMM0 328 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 CENPVL1A0A0U1RR11 272 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 A0A1W2PPB8 328 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 A0A1W2PRS3 328 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 SAGE2PA6NJ88 616 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 CLCA1A8K7I4 914 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 KIR3DP1A8MWS1 328 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TGFBR3LH3BV60 316 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 ARPC2O15144 300 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TOX3O15405 576 aaPredicted RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 KLF7O75840 302 aaPredicted RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 RPP14O95059 124 aaKnown RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 KCNK2O95069 426 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 PLATP00750 562 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 IL2RAP01589 272 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 LPCAT4Q643R3 524 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TRIM46Q7Z4K8 759 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 ARPINQ7Z6K5 226 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 BPHLQ86WA6 291 aaPredicted RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 SULF2Q8IWU5 870 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 CACTIN-AS1Q8N1I8 211 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 FAM26EQ8N5C1 309 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 EXD3Q8N9H8 876 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TNIP2Q8NFZ5 429 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 OR10H5Q8NGA6 315 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 OR52L1Q8NGH7 329 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 LRTOMTQ8WZ04 291 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 ZNF570Q96NI8 536 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 BHLHE41Q9C0J9 482 aaPredicted RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 ZNF552Q9H707 407 aaPredicted RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 TUBA8Q9NY65 449 aaPredicted RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 DUSP13Q9UII6 198 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 NME4O00746 187 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 DEAF1O75398 565 aaPredicted RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 IGHEP01854 428 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 CD63P08962 238 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 ACP2P11117 423 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 PPIBP23284 216 aaKnown RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 MAGEA12P43365 314 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 CD97P48960 835 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 NUDT6P53370 316 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 CARD18P57730 90 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 RIN1Q13671 783 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 SNAPC1Q16533 368 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 METTL21CQ5VZV1 264 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 C9orf40Q8IXQ3 194 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 MEIOBQ8N635 442 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 TMEM234Q8WY98 164 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 FAM46AQ96IP4 442 aaKnown RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 AICDAQ9GZX7 198 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 VCX3BQ9H321 246 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 LYRM4Q9HD34 91 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 GPR52Q9Y2T5 361 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 KLF13Q9Y2Y9 288 aaPredicted RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 AP4S1Q9Y587 144 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 TTC36A6NLP5 189 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 DPM1O60762 260 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 ALBP02768 609 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 ATP6V1B1P15313 513 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 RPS3AP61247 264 aaKnown RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 EBPQ15125 230 aaKnown RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 TMEM201Q5SNT2 666 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 HIST2H2BCQ6DN03 193 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 TTC33Q6PID6 262 aaPredicted RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 IKBIPQ70UQ0 350 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 IQCF1Q8N6M8 205 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 OR4K13Q8NH42 304 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 ZNF845Q96IR2 970 aaPredicted RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 SDF2Q99470 211 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 NARFLQ9H6Q4 476 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 CHCHD3Q9NX63 227 aaKnown RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 UBAP1Q9NZ09 502 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 CALML5Q9NZT1 146 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 NOX1Q9Y5S8 564 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 PRICKLE3O43900 615 aaPredicted RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 CBX7O95931 251 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 FESP07332 822 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 RFPL3SP0C7P2 107 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 PAICSP22234 425 aaKnown RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 IL32P24001 234 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 UCNP55089 124 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 FAPQ12884 760 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 MLC1Q15049 377 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 MAPK14Q16539 360 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 TBR1Q16650 682 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 TMEM236Q5W0B7 351 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 KLHL17Q6TDP4 642 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 KANSL1Q7Z3B3 1105 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms