RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 CHEK2O96017 543 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 UBL4AP11441 157 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 POU3F2P20265 443 aaPredicted RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 PRPH2P23942 346 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 GRK2P25098 689 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 TACR1P25103 407 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 SRD5A2P31213 254 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 EVI2BP34910 448 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 GPC1P35052 558 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 KIR2DL3P43628 341 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 RFX3P48380 749 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 STARP49675 285 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 DGKQP52824 942 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 RPL38P63173 70 aaKnown RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 HSPB3Q12988 150 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 STX5Q13190 355 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 KIAA0040Q15053 153 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 ZNHIT3Q15649 155 aaPredicted RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 PLXDC2Q6UX71 529 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 C16orf89Q6UX73 402 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 ZNF551Q7Z340 670 aaPredicted RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 SZRD1Q7Z422 152 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 AMIGO2Q86SJ2 522 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 SLC7A5P1Q8MH63 180 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 C9orf106Q8NAJ2 232 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 OR2T11Q8NH01 316 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 CLHC1Q8NHS4 586 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 MBD3L2Q8NHZ7 208 aaPredicted RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 ZPLD1Q8TCW7 415 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 RNASE6Q93091 150 aaKnown RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 CIDECQ96AQ7 238 aaPredicted RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 C12orf43Q96C57 262 aaKnown RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 ELP4Q96EB1 424 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 DUS3LQ96G46 650 aaKnown RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 TXNDC15Q96J42 360 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 CLPTM1LQ96KA5 538 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 EGLN2Q96KS0 407 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 CNBD2Q96M20 576 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 AMDHD1Q96NU7 426 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 TSSK3Q96PN8 268 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 CALHM2Q9HA72 323 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 Q9N2J8 555 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 EQTNQ9NQ60 294 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 THAP1Q9NVV9 213 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 C1orf109Q9NX04 203 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 TAS2R7Q9NYW3 318 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 FLRT3Q9NZU0 649 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 CRIM1Q9NZV1 1036 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 PPP4R1LQ9P1A2 415 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 ZNF629Q9UEG4 869 aaPredicted RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 CBLCQ9ULV8 474 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 C19orf53Q9UNZ5 99 aaPredicted RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 RPH3AQ9Y2J0 694 aaPredicted RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 WBP11Q9Y2W2 641 aaKnown RBP7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 CCL27Q9Y4X3 112 aa7.75□□□□□ -1.17
SFSWAP-202ENST00000535202 LOC105371267A0A1B0GV96 52 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 CLCA1A8K7I4 914 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 TMEM233B4DJY2 109 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 B4DXG7 233 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 SYT5O00445 386 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 PLOD2O00469 737 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 AKAP10O43572 662 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 CHRNGP07510 517 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 LINC00032P0C843 101 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 TMIGD3P0DMS9 266 aaPredicted RBP7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 CPN1P15169 458 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 JUNBP17275 347 aaPredicted RBP7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 SDC1P18827 310 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 HK1P19367 917 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 CTSSP25774 331 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 DPP4P27487 766 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 OPRM1P35372 400 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 LHX2P50458 406 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 BMXP51813 675 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 GAS1P54826 345 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 GFRA1P56159 465 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 GAB1Q13480 694 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 DECR1Q16698 335 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 CYP27C1Q4G0S4 372 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 ZNF385BQ569K4 471 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 KANK2Q63ZY3 851 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 NXNQ6DKJ4 435 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 KRT80Q6KB66 452 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 POMZP3Q6PJE2 187 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 Q6ZSR9 355 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 VASH1Q7L8A9 365 aaPredicted RBP7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 CLVS1Q8IUQ0 354 aaPredicted RBP7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 DDIASQ8IXT1 998 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 OR2L13Q8N349 312 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 FBXO27Q8NI29 283 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 AGR3Q8TD06 166 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 RNF138Q8WVD3 245 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 TWIST2Q8WVJ9 160 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 NRGNQ92686 78 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 PPCDCQ96CD2 204 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 METTL2AQ96IZ6 378 aaKnown RBP7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 FAM111AQ96PZ2 611 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 LMF2Q9BU23 707 aaKnown RBP7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 TRMOQ9BU70 441 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms