RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 MAP1AP78559 2803 aaPredicted RBP9.37□□□□□ -0.91
CAPN1-225ENST00000533704 DSCAMO60469 2012 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 A0A0J9YW62 118 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 PRSS51A0A1B0GVH4 220 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 FAM221AA4D161 298 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 C7orf72A4D263 438 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 DUXAA6NLW8 204 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 E9PBE3 544 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 SDHDO14521 159 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 LINGO3P0C6S8 592 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 OR12D1P0DN82 309 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 UBL4AP11441 157 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 CD1EP15812 388 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 UQCRC2P22695 453 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 PSMA4P25789 261 aaKnown RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 SHC1P29353 583 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 EIF1P41567 113 aaKnown RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 P2RX1P51575 399 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 CLNS1AP54105 237 aaKnown RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 MAGOHP61326 146 aaKnown RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 UFM1P61960 85 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 PHC1P78364 1004 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 FGFBP1Q14512 234 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 TOMM34Q15785 309 aaPredicted RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 CTU2Q2VPK5 515 aaKnown RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 FAM174BQ3ZCQ3 159 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 ANKRD34AQ69YU3 496 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF474Q6S9Z5 364 aaPredicted RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 ESPNLQ6ZVH7 1005 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 FAM214BQ7L5A3 538 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF550Q7Z398 422 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 HMGN2P46Q86SG4 172 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 OR8J2Q8NGG1 315 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 XAGE5Q8WWM1 108 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 ROBO4Q8WZ75 1007 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 OSTF1Q92882 214 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 ADGRG7Q96K78 797 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 WFIKKN1Q96NZ8 548 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 WDR55Q9H6Y2 383 aaPredicted RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 C12orf49Q9H741 205 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 MEAF6Q9HAF1 191 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 EXD2Q9NVH0 621 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 PAQR5Q9NXK6 330 aaPredicted RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 C6orf203Q9P0P8 240 aaPredicted RBP9.36□□□□□ -0.91
CAPN1-225ENST00000533704 DTNAQ9Y4J8 743 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 ARID1AO14497 2285 aa9.36□□□□□ -0.91
CAPN1-225ENST00000533704 ACANP16112 2415 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 MTORP42345 2549 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 CENPVL1A0A0U1RR11 272 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 SERINC4A6NH21 518 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 TRPC5OSA6NMA1 111 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 NPIPB9F8W1W9 429 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 C16orf97H3BN30 126 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF195O14628 629 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 ANKRD28O15084 1053 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF264O43296 627 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 FCMRO60667 390 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 STX11O75558 287 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 AK1P00568 194 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 CSTAP01040 98 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 HRGP04196 525 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 ALDOCP09972 364 aaKnown RBP9.35□□□□□ -0.91
CAPN1-225ENST00000533704 UBTFL6P0CB48 400 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-225ENST00000533704 CD8BP10966 210 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 EPHA3P29320 983 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 KHKP50053 298 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 SUMO3P55854 103 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-225ENST00000533704 CARD18P57730 90 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 CBFBQ13951 182 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 KEAP1Q14145 624 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 QPRTQ15274 297 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 DPY19L1Q2PZI1 675 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 TMEM176BQ3YBM2 270 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-225ENST00000533704 GPAT3Q53EU6 434 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 ATG16L1Q676U5 607 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 PAMR1Q6UXH9 720 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 SPNS3Q6ZMD2 512 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 TOR1AIP2Q8NFQ8 470 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 OR6K3Q8NGY3 331 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 OR5W2Q8NH69 310 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 GPR119Q8TDV5 335 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 NINJ1Q92982 152 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 TESCQ96BS2 214 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 REXO5Q96IC2 774 aaKnown RBP9.35□□□□□ -0.91
CAPN1-225ENST00000533704 GMPPAQ96IJ6 420 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-225ENST00000533704 MARK4Q96L34 752 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 TEX37Q96LM6 180 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 ZBTB18Q99592 522 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 SLC35A5Q9BS91 424 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 AIG1Q9NVV5 245 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 THAP1Q9NVV9 213 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 ELOVL5Q9NYP7 299 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 HAO1Q9UJM8 370 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 ICAM5Q9UMF0 924 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 TESMINQ9Y4I5 508 aa9.35□□□□□ -0.91
CAPN1-225ENST00000533704 GPC6Q9Y625 555 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-225ENST00000533704 CCDC154A6NI56 674 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 GJE1A6NN92 205 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 ADAMDEC1O15204 470 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 HDAC3O15379 428 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms